| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2254 |
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| Symbol | gcvT |
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| ID | 7386349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1853118 |
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| End bp | 1854257 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651426 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_002549620 |
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| Protein GI | 222148663 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.397121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACGACC ATCTCGCCCT CAAACGCACC CCCCTTTATG ATCTTCACCT GTCGCTTGGT
GCCCGCATGG TGGGTTTTGC TGGCTATGAT ATGCCAGTGC AATATCCCGC TGGTGTTTTG
AAGGAGCATT TGCACACCCG CGCCAACGCC GGCTTGTTTG ATGTGTCCCA CATGGGGCAA
GTGCTGCTCA AGCCAAAATC CGGCAAGGTG CAAGATGCAG CACTTGCGCT GGAAACGCTG
GTTCCGGTGG ATATTCTGGC CCTGAAAGAA GGGCGTCAGC GCTATGGCTT TTTTACCAAT
GAAGATGGCG GCATTCTGGA TGATCTGATG ATCACCAATC GTGGCGATCA TTTGTTTGTG
GTGGTCAATG CCGCCTGTAA AGATGCCGAT ATTGCCCATA TGCGGGCGCA TCTTGCGGAG
AACTGCACCA TTGAGGTTCT GGAAGACCGC GCCCTTCTTG CCCTGCAAGG CCCCCGTGCC
GAGGCTGTTC TCGGTGAGCT TTGGGCTGGC GTCTCCGGCA TGAAATTCAT GGATGTGCGC
GAAATTCCGC TTCTGGATAC GCTCTGCATC GTCTCCCGTT CCGGCTATTC CGGTGAGGAT
GGCTTTGAAA TCTCTGTGCC TGCGGATAAG GCCGAAGCGC TTGCCAAAGT GCTGCTGGAT
CATCCGGATT GTCAGCCAAT TGGCCTTGGT GCCCGTGACT CACTAAGGTT AGAAGCTGGC
CTTTGCCTCT ATGGCAACGA CATTGACACC ACCACAAGCC CGGTGGAAGG CGCGATTGAA
TGGGGCATTC AAAAGGCCCG CCGCGCTGGC GGTGATCGCG AAGGCGGTTT TCCCGGTGCT
TCGCGCATTC TGACTGAGCT GGCAAACGGC ACCTCCCGCC GCCGCGTTGG CCTGAAGCCC
GAAGGCAAAG CGCCTGTGCG CGGCCATTCC AAACTGTTTG CGGATGCCGA GGGCAAGGTT
GAGGTTGGCG AAGTCACCTC TGGCGGCTTT GGCCCCACGG TCGAAGGTCC GGTTGCCATG
GCCTATGTCA GCGCCGACCA CGCCAGTGTT GGCACCCAGC TTTTCGCAGA GGTACGCGGC
AAATATCTGC CTGTAACTGT TGCCACCCTG CCCTTCATTA CACCCACCTA CAAACGCTAA
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| Protein sequence | MDDHLALKRT PLYDLHLSLG ARMVGFAGYD MPVQYPAGVL KEHLHTRANA GLFDVSHMGQ
VLLKPKSGKV QDAALALETL VPVDILALKE GRQRYGFFTN EDGGILDDLM ITNRGDHLFV
VVNAACKDAD IAHMRAHLAE NCTIEVLEDR ALLALQGPRA EAVLGELWAG VSGMKFMDVR
EIPLLDTLCI VSRSGYSGED GFEISVPADK AEALAKVLLD HPDCQPIGLG ARDSLRLEAG
LCLYGNDIDT TTSPVEGAIE WGIQKARRAG GDREGGFPGA SRILTELANG TSRRRVGLKP
EGKAPVRGHS KLFADAEGKV EVGEVTSGGF GPTVEGPVAM AYVSADHASV GTQLFAEVRG
KYLPVTVATL PFITPTYKR
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