| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2230 |
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| Symbol | tpiA |
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| ID | 7386335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1832793 |
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| End bp | 1833563 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651412 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_002549606 |
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| Protein GI | 222148649 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAG ATGTACGTCC GCTTGTTGCG GGCAATTGGA AGATGAACGG AACCCGCGAC
GCGCTGGATC AGATCAAGGC GATGGCCGAA GGCGTGAAAG GGCCGCTCAG CGAGACCGTG
GACAGTCTGA TTTGCCCGCC GGCCACCCTG CTTTACGTGG CAACCGCGCT CTGCGACGAC
AGCCCGCTGC TGATCGGCGC GCAGGATTGC CATCAAAATG CATCTGGCGC CCATACCGGC
GATATTTCGG CGGAAATGGT CGCCGATTGC TTCGGAACCC ATGTGATTGT CGGTCATTCC
GAACGCCGTA CCGATCACGC GGAAACCGAC CATCTGGTGC GCGCCAAAGC GGTTGCGGCC
CATGCGGCGG GACTGACGGC CATCATCTGC ATCGGCGAGA CAGCCGATCA GCGCAAAGCA
GGGCAGACGC TGGATATTCT CAAGCGTCAG CTCTCCGGTT CCGTGCCGGA CGAAGCGCTC
GCCGAAGATA CGGTCATTGC CTATGAGCCC GTCTGGGCGA TCGGCACCGG CGTGACGCCA
ACTATCGCAG ACGTGACCGA GGCCCACGCT TTCATGCGGG CCGAGTTGAC GCGCAGGCTG
GGCGATGAGG GTGCGAAAAT GCGAATCCTC TATGGTGGTT CCGTCAAGCC GTCGAATGCA
CGGGAACTGA TGGGCGTTGC CAATGTGGAT GGTGCGCTGA TTGGTGGCGC AAGCTTGAAA
GCCGCTGATT TCCTTGCCAT ATACGGTGTC TATTCGGATT TGACAGCCTG A
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| Protein sequence | MTPDVRPLVA GNWKMNGTRD ALDQIKAMAE GVKGPLSETV DSLICPPATL LYVATALCDD
SPLLIGAQDC HQNASGAHTG DISAEMVADC FGTHVIVGHS ERRTDHAETD HLVRAKAVAA
HAAGLTAIIC IGETADQRKA GQTLDILKRQ LSGSVPDEAL AEDTVIAYEP VWAIGTGVTP
TIADVTEAHA FMRAELTRRL GDEGAKMRIL YGGSVKPSNA RELMGVANVD GALIGGASLK
AADFLAIYGV YSDLTA
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