Gene Avi_2225 details

Gene Information

• Locus tag: Avi_2225
• ID: 7386331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1827359
• End bp: 1827844
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643651408
• Product: acetyltransferase
• Protein accession: YP_002549602
• Protein GI: 222148645
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1246] N-acetylglutamate synthase and related acetyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.533627
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGTGA CCATTCCCCT TTTGGCAATC ACCATTGAAG CGCCACGACA GCCCGACGTG 
ATCCGCTTGC TGGATCTCTC CGATGCTTAT ATGGCCGCAC TCTATCCGGC GGAAAGCAAT 
CATCTTTTGG ATGTCTCATC CCTGGAAAAG CCTGGTGTCC ATTTTTTCGT GGCGCGCCAT 
GAGGGGCAGG TGGTGGGTTG CGCCGCCATT GTCGAGGCTG GCGATGGCAC GGCGGAGATC 
AAGCGGATGT TTGTCGATCC CCGATCAAGA GGGCTGTCGC TTGGCAAGAC GCTGATGGCG 
GCATTGGAAG ACCAGGCAAA AACGCTTGGC CTTGAAGCGT TGCGCCTCGA GACGGGTATT 
AGCCAGCCGG AGGCGATCGG TCTTTACCGA AAAGCCGGTT TTCAGGAAAT TCCGCCCTTC 
GGCTCATACC GTCCCGATCC GCTCAGCCTT TTCATGGAAA AACGTCTGGA AAATCCAGTC 
GTTTGA 

 

Protein sequence

MSVTIPLLAI TIEAPRQPDV IRLLDLSDAY MAALYPAESN HLLDVSSLEK PGVHFFVARH 
EGQVVGCAAI VEAGDGTAEI KRMFVDPRSR GLSLGKTLMA ALEDQAKTLG LEALRLETGI 
SQPEAIGLYR KAGFQEIPPF GSYRPDPLSL FMEKRLENPV V