Gene Avi_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2220 
Symbol 
ID7387922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp1823671 
End bp1824255 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content58% 
IMG OID643651403 
Productnitroreductase family protein 
Protein accessionYP_002549597 
Protein GI222148640 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.605376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAC ATATCACCCT TCTCGATTAT TTGGCCACCC GTCGTTCCGT TCCGGCTTTT 
CAGATGTGCG AGCCCGGTCC CTCCAGACTA GAGCTTGAAT CTATCCTAAA GCTTTCGGTG 
CGCGTCCCCG ACCACGGCAA GATCGCCCCC TGGCGCTTCA TCGTTTATCG TGGCGATAAG 
CGGGTTGAAA TCGGCGAGGT GCTGCTGGCC ATGGCGCTGG AGAAAAAGCC CGAACTGGAT 
GAGGAGATGA TCAAGGTCGA GCGCGCCCGC TTTACCCGCG CCCCAGTGGT GATCGGGGTG 
ATCAGCACGG CGGGACCGCA TCCCAAGGTG CCGGAATGGG AGCAGGTCAT GTCGGCGGGT 
GCCGTGTGCC TCAATCTGTT GATGGCGGCC AACGCCCATG GCTATGTGGC CAATTGGCTG 
TCCGAATGGT TTGCCTTCGA TGAAAAAGCG TTTCCCTTGC TGGGCATCAA GCCGGGCGAG 
AAGGTGGCGG GCTTTATTCA CATGGGGTCC ACGACATTTC CGATTGTCGA GCGCCCGCGT 
CCGAGCATAG ATGAAGTGGT CAGTTGGATG GGAGACACGG ATTGA
 
Protein sequence
MYEHITLLDY LATRRSVPAF QMCEPGPSRL ELESILKLSV RVPDHGKIAP WRFIVYRGDK 
RVEIGEVLLA MALEKKPELD EEMIKVERAR FTRAPVVIGV ISTAGPHPKV PEWEQVMSAG 
AVCLNLLMAA NAHGYVANWL SEWFAFDEKA FPLLGIKPGE KVAGFIHMGS TTFPIVERPR 
PSIDEVVSWM GDTD