Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2211 |
Symbol | thrS |
ID | 7387915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1815138 |
End bp | 1817138 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643651396 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_002549590 |
Protein GI | 222148633 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.920891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACA CCGTTTCCCT TACATTTCCC GATGGTTCCG TGCGCAGCTT TGCGGCTGGC GCGACCGGTC GTGATGTCGC CGAATCGATT TCCAAATCGC TGGCCAAGAA GGCCGTGGCC ATTGCTCTCG ATGGCGTTGT GCGCGATCTC GCCGACCCGG TTGTCGATGG AAAAATCGAG ATCGTCACCC GCGCCGATCC GCGTGCGCTG GAACTGATCC GTCACGACAC CGCCCATGTT CTCGCCGAAG CGGTGCAGGA AATGTGGCCG GGCACGCAGG TGACCATCGG TCCGGTGATC GAAAACGGTT TCTACTACGA CTTTGCCAAA AACGAGCCGT TCACGCCGGA AGATCTGCCG AAGATCGAAA AGAAGATGAA GGAAATCATC CAGCGCAATC AGCCGTTCCG CAAGGAAGTC TGGTCGCGTG AAAAGGCGCG CGAAGTGTTT GCCGCCAAGG GCGAATCCTA CAAGGTCGAG CTGATCGATG CCATTCCTGA AGATCAGGAC ATCAAGATCT ATTATCAGGG CGACTGGTTC GATCCTTGCC GTGGACCGCA TATGGCCTCC ACCGGCCAGA TCGGCACGGC CTTCAAGCTG ATGAAGGTGG CCGGTGCTTA TTGGCGCGGC GACAGCAACA ATCCGATGCT GACGCGCATC TACGGGACGG CCTTTGCCGA GCAGGAACAG CTCGACAATT ACCTGCACAT CCTGGCGGAA GCCGAAAAGC GTGACCACCG CAAGCTGGGC CGTGAAATGG ACCTGTTCCA TTTCCAGGAA GAAGGCCCAG GCGTGGTGTT TTGGCATGGC AAGGGCTGGA AAATGTTCCA GTCGCTGACC GCCTATATGC GCCGTCGGTT GGCCAACACC TATCAGGAAG TCAACGCGCC GCAGGTGCTG GACAAGTCGC TCTGGGAAAC CTCCGGCCAT TGGGGCTGGT ATCAGGAAAA CATGTTCGCG GTGAAATCCG CCCATGCCTT TACCAATCCG AACGATCCGG AAGCTGACCA GCGCGTCTTT GCCTTGAAGC CCATGAACTG CCCCGGCCAC GTGCAGATAT TCAAGCATGG GTTGAAGTCT TACCGTGAAC TGCCTGTTCG TCTTGCGGAA TTTGGTCTTG TGCATCGCTA TGAAGCATCG GGCGCTTTGC ATGGCTTGAT GCGTGTGCGC GGTTTCACGC AGGATGATGC GCATGTGTTC TGCACGGAAG AGCAAATGGC GGCTGAATGC CTGCGGATCA ACGATCTGAT CCTGTCGGTT TATGAGGATT TCGGCTTCAA GGAAGTCGTA GTCAAGCTCT CGACCCGTCC GGAAAAGCGC GTCGGCTCCG ACGAACTTTG GGATCGCGCC GAAAGCGTGA TGACCGAGGT GTTGAAGGCC ATCGAAGAGC AGTCCGGTGG GCGCATCAAG ACCGGTATTC TGCCGGGCGA GGGTGCATTC TACGGTCCGA AATTCGAATA TACGCTGAAG GATGCGATTG GTCGTGAATG GCAATGCGGC ACGACGCAGG TGGATTTCAA CCTGCCGGAA CGTTTCGGTG CCTTCTATAT CGACCAGCAT TCGGAAAAGA CCCAACCGGT GATGATTCAC CGCGCCATTT GCGGCTCGAT GGAGCGGTTC CTTGGCATTC TGATCGAGAA TTTTGCTGGT CACATGCCGC TGTGGTTTGC GCCCTTGCAG GTGGTGGTGG CGACCATTAC CTCCGAGGCT GACGACTATG GCCGCGACGT AGCCGAACAG CTGCGCGACG CGGGTCTCGA AGTGGAAACC GATTTCCGCA ACGAGAAGAT CAACTACAAG GTCCGTGAGC ATTCGGTCGG CAAGGTGCCT GTCATCATGG TTTGCGGTAA GCGCGAGGCG GAAGAACGCA CGGTCAATAT CCGCCGTCTC GGCAGCCAGG ATCAGGTGTC GATGACGCTG GATGAGGCGA TTGCCAGCCT AGTCGATGAA GCCACGCCAC CGGATGTAAA GCGCAAGCGG GCGGCCAGGA AGCCCGCTTA A
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Protein sequence | MSDTVSLTFP DGSVRSFAAG ATGRDVAESI SKSLAKKAVA IALDGVVRDL ADPVVDGKIE IVTRADPRAL ELIRHDTAHV LAEAVQEMWP GTQVTIGPVI ENGFYYDFAK NEPFTPEDLP KIEKKMKEII QRNQPFRKEV WSREKAREVF AAKGESYKVE LIDAIPEDQD IKIYYQGDWF DPCRGPHMAS TGQIGTAFKL MKVAGAYWRG DSNNPMLTRI YGTAFAEQEQ LDNYLHILAE AEKRDHRKLG REMDLFHFQE EGPGVVFWHG KGWKMFQSLT AYMRRRLANT YQEVNAPQVL DKSLWETSGH WGWYQENMFA VKSAHAFTNP NDPEADQRVF ALKPMNCPGH VQIFKHGLKS YRELPVRLAE FGLVHRYEAS GALHGLMRVR GFTQDDAHVF CTEEQMAAEC LRINDLILSV YEDFGFKEVV VKLSTRPEKR VGSDELWDRA ESVMTEVLKA IEEQSGGRIK TGILPGEGAF YGPKFEYTLK DAIGREWQCG TTQVDFNLPE RFGAFYIDQH SEKTQPVMIH RAICGSMERF LGILIENFAG HMPLWFAPLQ VVVATITSEA DDYGRDVAEQ LRDAGLEVET DFRNEKINYK VREHSVGKVP VIMVCGKREA EERTVNIRRL GSQDQVSMTL DEAIASLVDE ATPPDVKRKR AARKPA
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