| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2204 |
|---|
| Symbol | |
|---|
| ID | 7387910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 1811417 |
|---|
| End bp | 1812367 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643651391 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549585 |
|---|
| Protein GI | 222148628 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.772676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAACT GGAATTTAAG AGGTCAAGGG GCCGGTCGGT CCGCAAAGCC AGGAAACCCA
TCGGGCGCAA GCACTGTCGC CGAATTGCCG CCGCCGGTCG TCAAGCCTAA GATTGCACTT
GCCCTTGGCG GCGGTGCGGC CCGTGGCTGG TCGCATATTG GGGTGTTGCG CGCGCTGGAT
GAGGCTGGCA TCGAAGTCGG CATGGTAGCG GGAACCTCTA TCGGTGCCCT GGTTGGCGGC
TGCTATCTGG CGGGAAAGCT GGATGAACTG GAGCAATTTG CGAGATCCCT GACCGTCCGG
CGCATCGCGG CCCTTCTCGA CCTGACCATT GGCGGCGGCG GCTTATTGGG CGGCATGCGC
CTGACGAAAC GCATGCAGGA ACATCTGGAA GGCCTGACCA TCGAAGATCT GCCGCAGCCC
TTCGTGGCGG TTGCCTCCGA ACTGACGAGC GGCCACGAAG TCTGGATTGA TGGCGGCAAT
CTGGTCACTG CGCTTCGCGC GTCCTACGCC TTGCCCGGTA TTTTCGAGCC GGTGCGCTGC
AACAACCGGA CGCTGGTCGA TGGTGCATTG GTCAATCCTG TCCCGGTGTC GGTCTGCCGC
TCTTACGAGC AGCCGCTGGT GGTGGCGGTT AACCTCCACT ACGATCTTTA TGGTCGCTCC
GCCGTGGTCA AGCACAAGGT CGGCCCAATT GGCCCGGATA CCGGCGCGGT AAAACAGCCG
AATCGGCTTG GGCTGACAGG CGTGATGGTG CAATCCTTCA ACATCATTCA GGATCGGATT
TCCCGCGCCC GGTTGGCAGG CGATCCGCCC GATCTGGCGC TGCATCCGCG TGTCAACGAT
ATTGGGCTAT CGGAATTTCA CCGCGCTGGT GAATGCATTG CGCGCGGCTA TGAAGAAACC
ATCGCCCGCA TCGCTGAAAT CCGCCGAATG CAGGAAGCTG TGATGCGATA A
|
|---|
| Protein sequence | MLNWNLRGQG AGRSAKPGNP SGASTVAELP PPVVKPKIAL ALGGGAARGW SHIGVLRALD
EAGIEVGMVA GTSIGALVGG CYLAGKLDEL EQFARSLTVR RIAALLDLTI GGGGLLGGMR
LTKRMQEHLE GLTIEDLPQP FVAVASELTS GHEVWIDGGN LVTALRASYA LPGIFEPVRC
NNRTLVDGAL VNPVPVSVCR SYEQPLVVAV NLHYDLYGRS AVVKHKVGPI GPDTGAVKQP
NRLGLTGVMV QSFNIIQDRI SRARLAGDPP DLALHPRVND IGLSEFHRAG ECIARGYEET
IARIAEIRRM QEAVMR
|
|---|
| |