| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2202 |
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| Symbol | |
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| ID | 7387908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1809879 |
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| End bp | 1810670 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651389 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549583 |
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| Protein GI | 222148626 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACA GGCCGAAGGG GCAATGGGAC CGCGAGCCTG AAGATGGGGA CGACCCGCTG
GACGAGGGAC TCGATCCGGC GACCAGTGGA CGCGAACCGG TGTTCAACAT GCCGGGCGGC
ATTCTTCTCG CGCTGATGCT GCTGGTGATG ATCTATGCCT TGACCGGCTG GATTTTGTCT
GATGAGATCT CCAATTGGAT CATGGTGGAA TTCGGCTTTT CGCCGGTTCG CTATGTCTAT
GATTTTTCCA ACCAGGATCT CGCCTGGCTG TGGACACCCT TCACCTATTC ACTGCTGCAT
GGCAGTATCG AGCATCTCGG CTTCAATGGC CTATGGCTCG CCGCCTTCGG CACGCCGGTC
TGGCGCCGTA TTGGGGCCGT GCGGTTCTGG TTATTCTGGC TGGCGACGTC AGCCGCTGGC
GCTGTTGCGC ATGTCTGCCT GAACTGGGGA GATGCAAGTC TTTTGATCGG CGCTTCCGGC
GTCATCTCCG GCCTGATGGG GGCTGCCTGC CGGTTTGCCT TCGGCCCCGG ACGCTCCGGC
CTGCGTCTGC GCGAACAGGA TGCCTTTCCA CCCCGATTGA GCGTGCTTGC CAGCCTGTCC
GAGCGCACGG TCCTTGTCTT CATTATCATG TTCCTAGCCG GAAATCTGAT TATCGCTTTC
GGGATTCCCT TGGTCGGCGA TCCTGGCGCG GCCATCGCCT GGGACGCGCA TTTGGGTGGC
TTCACCCTAG GTTTTCTGGG GTTTGCGCTG TTTGACCGCC GCCCAATCGG GCAAAAAACG
GCGGTCGATT AA
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| Protein sequence | MDDRPKGQWD REPEDGDDPL DEGLDPATSG REPVFNMPGG ILLALMLLVM IYALTGWILS
DEISNWIMVE FGFSPVRYVY DFSNQDLAWL WTPFTYSLLH GSIEHLGFNG LWLAAFGTPV
WRRIGAVRFW LFWLATSAAG AVAHVCLNWG DASLLIGASG VISGLMGAAC RFAFGPGRSG
LRLREQDAFP PRLSVLASLS ERTVLVFIIM FLAGNLIIAF GIPLVGDPGA AIAWDAHLGG
FTLGFLGFAL FDRRPIGQKT AVD
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