Gene Avi_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2198 
Symbol 
ID7387905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1805600 
End bp1806121 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID643651386 
Producthypothetical protein 
Protein accessionYP_002549580 
Protein GI222148623 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA ATGGCAGAGC CAGTCAGCCG ATAGGCCATT ACGAGTTCTG CCAGCGTTAT 
GCCAGCGAAT GCCGCCCCTC CGGCAGCGAC AGAGGTCCGC AACAGCTGAC GCCCGCGCTC 
TGGCAAGACA TTCTTGCCGT GAACTACACC GTCAACACCA CGATCAAGCC GGAAACCGAT 
ATGGATCTTT ACGGTGTCGA GGAATGGTGG GAATACCCAA CCGTTGCCGG CGACTGCGAA 
GATTACGCCC TGCTCAAGCG CCGTCAGTTG ATTGCGAAAG GCGTAGACGA ATCCAACCTG 
CTGATAACCG TGGTGCTGCA ACCGAATGGC GACGGCCATG CCGTGCTGAC CGTCCGCACC 
GATCGCGGTG ATTTCATCCT CGACAACATG CGCAACAAGG TACTGCTCTG GTCGGATACG 
GAATATACGT TCCTGAAACG CCAGTCCTCC GACAATCCGG GTCAATGGAT GAAGATCCAG 
GATGGGCGCG CGCCAACGGT TGCCGCCCTT CCGAAAAACT GA
 
Protein sequence
MKINGRASQP IGHYEFCQRY ASECRPSGSD RGPQQLTPAL WQDILAVNYT VNTTIKPETD 
MDLYGVEEWW EYPTVAGDCE DYALLKRRQL IAKGVDESNL LITVVLQPNG DGHAVLTVRT 
DRGDFILDNM RNKVLLWSDT EYTFLKRQSS DNPGQWMKIQ DGRAPTVAAL PKN