| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2182 |
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| Symbol | |
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| ID | 7387894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1795436 |
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| End bp | 1796584 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651375 |
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| Product | transcriptional regulator ROK family |
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| Protein accession | YP_002549569 |
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| Protein GI | 222148612 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCC AAGCCAAACA GCCCTCTCGC TTTGACAGAA ACCCGCTTGC CAGCGAGAAC
GAACGCCTGA TTCTGGACAT CGTCCGCCGC CACGGACCCA TTGCCCGCTC AGTGATCACC
ACCCACACCA ACCTGACGCA ACAATCGGTG CATCGGTTGA TTGAGGGGCT GATCGAGCGC
GGTTTGCTGC GTACCGGCGC GCCGCTGAAG GGCGCACGCG GCCAGCCGAG CCCGACCATC
GAGCTTGCGG TGGAATCCGT GGCGTCGCTG GGCATATCGA TCAACACCGA TTCGGCGATT
ATCTGCCTCG CGGATTTCAG CTGCGGCGTG ATTGCCCAGA AGAAACTCGA GCTCCTGCCG
CTCAGCCGGG AAGCCACCCT TGTTTCCTTA TCACGGACCC TGGATGAGAT GCTTGAGGCC
CATAATCTGC CGCGCGACCG GCTGCTGGGG CTGGGTTTTG CCATGTCGGG TTTTTCCGTT
GCCGATGACC GGATATTCAA TGCGCCGGAA CCCTTGCAGG ACTGGTCGCT GATGGATCTT
CGCCCGATCC TTGAACAGAC GTTTCAGCTT CCCGTCTGGC AGGAGAACAA TGCGACCACA
GGCGCTATCG GCGAAAGCTT GCAAGGCGTT GGGCGATGGT GCCAGACCTT TGCCTACCTG
TCGTTCAACT ATGGCTTCGG TGGCGGGTTG ATCCTCAATG GTCAGCCGTT TTACGGATTC
CATGGCAATG CCGCTGAATT GTCGGGGATT TACGACCCGA CCGAGGCACC TCGGCGTCCA
GCCCTGCAAT ATTTGCTTCG GAGCCTTCAA GACCACGGCA TCGAGATTGA TTCCGTCGAT
ACCCTTTACC GGACATTCGA CCCAGGTTGG CCAGGCGTGG AAGCGTGGCT GGAAGCAACC
ATGCCACAGG TCGAACGCCT GGTGGCGGTA TTGATCGCCG TGATCGATCC GCAGGCCATC
GTTTTCGGCG GCCAATTGCC GCCAGCGCTG GGCGCGATGA TGATCGAAAG ATGCCCGATG
CCCTCGCAGC GGGTTCATCG TTATGGTGTC GGGCCAAAGG AGGCCCGACT GGTGCTTAGT
GAAGTGAAGG GTGATGCCGC AGTCATTGGT GCAGCGCTCC TGCCGCTCAA GATGCGGTAT
TTTATTTAA
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| Protein sequence | MTTQAKQPSR FDRNPLASEN ERLILDIVRR HGPIARSVIT THTNLTQQSV HRLIEGLIER
GLLRTGAPLK GARGQPSPTI ELAVESVASL GISINTDSAI ICLADFSCGV IAQKKLELLP
LSREATLVSL SRTLDEMLEA HNLPRDRLLG LGFAMSGFSV ADDRIFNAPE PLQDWSLMDL
RPILEQTFQL PVWQENNATT GAIGESLQGV GRWCQTFAYL SFNYGFGGGL ILNGQPFYGF
HGNAAELSGI YDPTEAPRRP ALQYLLRSLQ DHGIEIDSVD TLYRTFDPGW PGVEAWLEAT
MPQVERLVAV LIAVIDPQAI VFGGQLPPAL GAMMIERCPM PSQRVHRYGV GPKEARLVLS
EVKGDAAVIG AALLPLKMRY FI
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