| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2180 |
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| Symbol | |
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| ID | 7387892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1792994 |
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| End bp | 1794034 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651373 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002549567 |
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| Protein GI | 222148610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGC TAGACATCAA CGACATCACC AAGGACTTCG GATCAGCCCG TGTCCTCCAT
CCGGTTTCGC TTACCGTCGA AAAGGGTGAA TTCGTCACCA TTCTCGGTCC CTCCGGCTGC
GGAAAATCGA CGCTGCTGCG CATCCTGATG GGCATCAGCG AGGCATCCGG CGGCGAAATC
CGGCTGGCGG GCAAGCGGAT TGACGAACTC GCGCCCGAAG CCCGCGATAT CGCCATGGTG
TTCCAGTCCT ATGCGCTGTT TCCGCATATG TCGGTCGCCA AAAACCTTGG CTTTGGCCTG
AAGATGAAGA ATGTGCAGAA AGACGAGAGG GCGCGGCGCA TCGCCCATGT GCTGGAGATC
TGCAATCTCG GCGCGTTGGT TGACCGTATG CCCCGGCAAT TGTCCGGCGG CCAGCAGCAA
CGCGTGGCGC TGGCCCGCGC CATTGTCATG CAGCCAAGTC TTTTGCTGTT TGACGAACCG
CTGTCTAATC TCGATGCCAA ACTGCGTGAC AGCCTGCGCC ACGAGCTGGT CGAACTGCAT
CGCCGCATCG GCGCAACAAG CCTTTACGTC ACCCATGACC AGGCCGAGGC CATGGCGATG
TCAGACCGGA TCGTGGTTAT GAACGGCGGT CAGGTTGTCG AAATCGGCAC GCCGCTGGAG
CTGTACCGGT CGCCAAAAGC GGCCTTTACA GCCAGCTTCC TCGGCCAGAC CAATCTTCTC
TCCGTCAAGG CGTCCGGCAT GGATGCGCTG CTCCCCTGGG GTCAGAACGT GGTGCTGGAC
CGTCCCGCTG CCGGACCTAT GCAGATTTCG GTCCGACCTG AAAATATCGG TATCGAACGC
GACGAAAACG GATCGGCAAC CGTCACCTCC GTCTCCTTCA TGGGTGCCAA TATCCTCTAC
ACCGCCGATA TCGGCGCGGT CAGGATCAAG ATCAGCCAGT CAGGCGGGGC GATACCGATA
GAGATGGGTA GCCGGGTCTC GCTGTCTTTC CACGATGCCG TGCATGTCCT CGAAGACCAG
CCGTCGATGG AGGCCGCCTG A
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| Protein sequence | MSELDINDIT KDFGSARVLH PVSLTVEKGE FVTILGPSGC GKSTLLRILM GISEASGGEI
RLAGKRIDEL APEARDIAMV FQSYALFPHM SVAKNLGFGL KMKNVQKDER ARRIAHVLEI
CNLGALVDRM PRQLSGGQQQ RVALARAIVM QPSLLLFDEP LSNLDAKLRD SLRHELVELH
RRIGATSLYV THDQAEAMAM SDRIVVMNGG QVVEIGTPLE LYRSPKAAFT ASFLGQTNLL
SVKASGMDAL LPWGQNVVLD RPAAGPMQIS VRPENIGIER DENGSATVTS VSFMGANILY
TADIGAVRIK ISQSGGAIPI EMGSRVSLSF HDAVHVLEDQ PSMEAA
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