| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2178 |
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| Symbol | |
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| ID | 7387890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1791277 |
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| End bp | 1792143 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651371 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002549565 |
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| Protein GI | 222148608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.178146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGGCCG TTCTTGAACT CGCCCCGCCT GCCACAGCAC GACGCCGCAT GTTCCGACCC
GAAGACCGCA TTCTCGTTAC TATTGGCCTG TTCGGTTCGC TGGCCCTTGC CATCGCCCTG
CCGCTCGCCC TGATGTTTAT CTGGAGCATT GCCGATGGCT GGCAGCCGCC GCATGTGCTG
CCGCAAGTCT ATACGGCCAG CCGCTGGGCC AGCGTGCTGA GTGATCAAGG CCTGCTCCAA
GCGATGGCAA CCAGCCTCGG CATCGCCTTC ACGGTCACGT TCGCAACGGC ACTTATCGCC
TTGCCGACCG CCTGGGCGAT GGCCCGCTTT CCCTTCCGGC TGAAACGGCT GGTGGAGATC
TTCATTCTCG CGCCAGTCAT CATTCCCGGT CTGGTGGTCG CGGTCGGCAT TGGCCAGGTG
TTTCTGGCGC TGGGCCTTGC CTATTCGGTG GCTGGCGTCA TCATTGTCCA GATCGTCGGC
ACCCTGCCGC TGATGATCCG GCTGATGACC GCAACGCTTG AGACCATTCC CGACGAATTG
ATCCATGCGG CCCGCTCGCT GGGTGCAGGA ACAGTTGGCA TTGTCGCGCA TATCATCCTG
CCGCTGGCCG TGCCCGGGCT GCTGGCGGGC GGGTTGATGT CGTTCATTGG CAGTTTCGAG
GAATTCGACA AATCCTTCAT TGTCGGCGCG CCTGTGGTCC AGACCCTGCC GATCAAGCTT
TACATGTATC TCGACCCCTA TTCGATGCAG CTGCCGCTGG CCGCCATCGT CTCCTTCATC
CTGCTTTTGC CAGCCCTCAT CGTCTTCATC ATCGCCGGTC GCATCCTGCG CGACGACCTG
ATGGCGGCAG GCATGGGCAA GATCTAA
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| Protein sequence | MMAVLELAPP ATARRRMFRP EDRILVTIGL FGSLALAIAL PLALMFIWSI ADGWQPPHVL
PQVYTASRWA SVLSDQGLLQ AMATSLGIAF TVTFATALIA LPTAWAMARF PFRLKRLVEI
FILAPVIIPG LVVAVGIGQV FLALGLAYSV AGVIIVQIVG TLPLMIRLMT ATLETIPDEL
IHAARSLGAG TVGIVAHIIL PLAVPGLLAG GLMSFIGSFE EFDKSFIVGA PVVQTLPIKL
YMYLDPYSMQ LPLAAIVSFI LLLPALIVFI IAGRILRDDL MAAGMGKI
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