| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2166 |
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| Symbol | |
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| ID | 7387881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1779451 |
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| End bp | 1781049 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651362 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
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| Protein accession | YP_002549556 |
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| Protein GI | 222148599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTCC CAACCGAGGC GGAGCAAGGG GGTCAAGTGT CGCATAGCAA AGAAGTAGCG
CTATCTCCGC TGCTTTCGGT TCGCAGCCTG ACGAAGCGAT TCGGTACATT TGCCGCCTGC
GATGGCATTG ATCTCGACAT TCTTCCCGGC GAAATCCACG CCCTCCTTGG AGAAAATGGC
GCGGGGAAAT CGACGCTGGT CAAAATGCTG TTTGGCGTGC TGACCCCGAG CGCTGGCGAG
ATCCTTTGGG ATAACCAGGG TGCCGTGGAG ATTGCCTCGC CTGCGCAAGC TCGCCAGCTT
GGTATAGGCA TGGTCTTTCA GCATTTTTCG CTGTTTGAAG CACTGACCGT GGCTGAGAAC
ATCGCCTTGT CCTTGGATCG TTCGGTTTCG ATTGGTGAAA TCTCCGAGAA GGCGCGGACC
TTGTCGCTGT CTTACGGTTT GCCGCTCGAT CCTTCGGCCC ATGTCGCGGA TCTGTCGGTG
GGCGAGCGTC AGCGGATCGA AATCGTCCGG GCATTGTTGC AAAATCCGAA ATTGATCATT
CTCGACGAGC CGACCTCGGT GCTGACCCCG CAGGAGGCGG ACAAGCTGTT TGAAACGCTG
GAAAAGCTGC GGGCCGAAGG GCGTTCAGTG CTCTATATCA GCCACCGGTT GGAAGAGGTG
CAGCGCATTT GCGACCGTGC CACGGTTTTA CGCCACGGTA AGGTGACAGG CACCTGCGAT
CCGCGTCAGG AAACCCCGTC CACGCTGGCG CGAATGATGG TAGGCGCGGA CGTCATCGGT
GTGACGCCGG ATGCCGCCGC GCCAGTTGGT GCGGACCTAC TCACTGTTCG CAATCTCAGC
GTTGATGCAC GCACGCCGTT TTCCATGGCG CTGAAGGATG TGTCGCTGAA CGTTCGTGCC
GGTGAAATCC TCGGACTGGC GGGCGTGGCC GGTAATGGCC AGAGCGAATT GTTTGATGTG
CTGTCGGGCG AATATACCGT GCGCGACCAT CAAGCCATCC AGCTATGCGG CCAACCGGTT
GGGCGCTTCG GTATCAACCG GCGTCGGTTG ATCGGCGCCG GGTTCGTGCC GGAAGAGCGC
CATGGCCATG CCGCCGTTAC CGGGCTTTCG CTGTCGGACA ATCTGCTGTT GGCGCGGCAT
GGCTCGGATC GTGGGCGTTA TGTCTCAGGT CTGTTCGGCC TGATCCGCCA CAGTGCCATC
AAGACCTCCA CCCGACAGAT TTGCGAGGCG ATGGATGTGC GAAAGAGCGG TGAGGACCCT
TCCGCCGGAT CGCTTTCGGG CGGCAACCTG CAAAAATTCA TTGTCGGGCG TGAGCTGGAC
CGCAAACCGG CGGTGCTGGT CGTCAACCAG CCGACCTGGG GTGTGGATGC GGGTGCGGCC
AGCCGTATTC GTCAGGCGTT GATCGATCTT GCAGCGCAAG GCTCGGCGGT GGTGATCATC
AGCCAGGATC TGGACGAGAT TTTTGAAGTC TCGACATCGA TTGCGGCGAT TTCGGAGGGC
AGGCTGTCGA AAGTCTATCC AAGCGGCGTG ATGAACCGCG AGAAGATCGG TCTGTTGATG
GGCGGCTTGC ATGGTCTGGA GAATGCCGAT GCGCATTGA
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| Protein sequence | MFVPTEAEQG GQVSHSKEVA LSPLLSVRSL TKRFGTFAAC DGIDLDILPG EIHALLGENG
AGKSTLVKML FGVLTPSAGE ILWDNQGAVE IASPAQARQL GIGMVFQHFS LFEALTVAEN
IALSLDRSVS IGEISEKART LSLSYGLPLD PSAHVADLSV GERQRIEIVR ALLQNPKLII
LDEPTSVLTP QEADKLFETL EKLRAEGRSV LYISHRLEEV QRICDRATVL RHGKVTGTCD
PRQETPSTLA RMMVGADVIG VTPDAAAPVG ADLLTVRNLS VDARTPFSMA LKDVSLNVRA
GEILGLAGVA GNGQSELFDV LSGEYTVRDH QAIQLCGQPV GRFGINRRRL IGAGFVPEER
HGHAAVTGLS LSDNLLLARH GSDRGRYVSG LFGLIRHSAI KTSTRQICEA MDVRKSGEDP
SAGSLSGGNL QKFIVGRELD RKPAVLVVNQ PTWGVDAGAA SRIRQALIDL AAQGSAVVII
SQDLDEIFEV STSIAAISEG RLSKVYPSGV MNREKIGLLM GGLHGLENAD AH
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