| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2162 |
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| Symbol | ccdA |
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| ID | 7387179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1776379 |
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| End bp | 1777125 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651359 |
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| Product | cytochrome c-type biogenesis protein |
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| Protein accession | YP_002549553 |
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| Protein GI | 222148596 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0785] Cytochrome c biogenesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.20604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGATTG CTGAAATTCC ATTTCTGACA GCGCTTGTGG CCGGGACCCT GTCCTTTCTC
TCGCCCTGTG TTTTGCCGCT GGTGCCGCCT TACCTCTGCT ATATGGCGGG CGTCAGCGTC
GAGCAGTTTC GCGGTGAAGC GGTAGCGGTT GACCGGCGGG CGCGCTCGGC GGTGATTTTT
TCGGCCCTGT GTTTCACCCT GGGCTTTGCA ACGGTCTTCG TGGCGCTCGG GGCGGGCGCG
TCCTCCATCG GTATGATGTT GCGTCAGCAT CTTGATCTCC TGTCGAAGAT TGGCGGCTTG
ATCATCATCG TTATGGGGCT GAATTTTCTA GGCCTGTTTC GCATCGGGCT TTTGGCGCGC
GAAATGCGCT TTGCAGGTGG CGGCAAGCCC GCGACCCTGA CAGGGGCCTA TGTGATGGGG
CTAGCCTTTG CCTTTGGCTG GACGCCCTGC ATCGGCCCTG TGCTGGGTGC TATTCTCGCG
GTCGCCGCAG CCCGTGACAC GGTCGGACAG GGGGCAGTGT TGCTGGCGGT CTATTCGCTG
GGGCTTGCCA TTCCGTTCTG GATCGCCGCT GGCTTTTCAG GGGCTTTCAT GCGGTTTCTC
ACCCGGTTTC GCCGCCATCT CGGTCTGGTG GAAAAGCTCA TGGGGCTGCT TCTGGTCGTA
ACCGGGCTTG CCTTCATCTT TGGTTTTGTG TCCGATCTGG CGATCTGGTT CCAGCAAAGC
TTTCCGATCC TGTCACGGAT CGGATAA
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| Protein sequence | MTIAEIPFLT ALVAGTLSFL SPCVLPLVPP YLCYMAGVSV EQFRGEAVAV DRRARSAVIF
SALCFTLGFA TVFVALGAGA SSIGMMLRQH LDLLSKIGGL IIIVMGLNFL GLFRIGLLAR
EMRFAGGGKP ATLTGAYVMG LAFAFGWTPC IGPVLGAILA VAAARDTVGQ GAVLLAVYSL
GLAIPFWIAA GFSGAFMRFL TRFRRHLGLV EKLMGLLLVV TGLAFIFGFV SDLAIWFQQS
FPILSRIG
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