| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2134 |
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| Symbol | ntrB |
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| ID | 7387854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1748035 |
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| End bp | 1749180 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651334 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002549529 |
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| Protein GI | 222148572 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.211649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAATG AACCGAAACC CGGCGATAGC AATATACTGG CGATGGCTGT GCTCAACGCC
ATCCAGAACC CGGTGGTCAT GGTCAATGGC GAGGGACATA TCGTTTTTGC CAATTGGGAG
GCAGAGGCGT TTTTCGGCGC CAGTGCCAGC CACCTCGCCC GCCACAAGAT TTCCACCTTC
ATTCCGTTCG GCAGTCCGCT GCTGGAACTG ATCGATCAGG TGCGGGAGCG GCGGGCACCC
GTCAATGAAT ACCGTGTCGA TCTCAGTTCT CCCCGGCTTG GCCAGGACAA GCTGGTCGAT
CTCTACGTCG CACCGGTCAC TGTCGAGCCG GGCGCTGTCG TCGTGGTGTT TCAGGAACGC
TCGATGGCCG ACAAGATCGA CCGTCAGCTC ACCCACCGCG CTGCCGCGCG CTCCGTCACC
GGCCTTGCCT CTATGCTTGC CCATGAAATC AAGAACCCGC TGTCCGGCAT TCGCGGGGCG
GCGCAATTGC TGGAAAGCTC CGTACCTCCA GAGGATCGCA GCCTGACCCG GCTGATCTGC
GACGAGACCG ATCGGATTGT CTCGCTGGTG GACCGTATGG AAATCTTTTC CGACGAGCGG
CCAGTGGATC GCACCTCGAT CAATATCCAT TCGGTGCTGG ACCATGTGAA GGCGATTGCT
CAGGCAGGCT TTGCCCGGCA TCTGAAGATC ACCGAGAGCT ACGACCCCTC GCTGCCGCCG
GTGTTTGCCA ACCGGGATCA ATTGGTGCAG GTGTTTTTGA ACCTGATCAA GAATGCCGCC
GAGGCGGTGG GCGACCGGGC CGATGGCGAA ATCCAGCTGA CCACGGCCTA TCGCCCCGGC
ATAAGGCTGT CGGTTGCCGG ATCGCGGGAA AAGATCTCGC TGCCGCTGGA ATTCTGCGTT
GCCGATAATG GTCCGGGCGT GCCTTCCGAC CTTCTGCCGC ATCTGTTTGA TCCGTTCATT
ACCACCAAGA CCAACGGATC TGGCCTGGGC CTTGCCCTGG TTGCCAAGAT CATCGGCGGC
CACGGCGGTA TTGTTGAATG CGACAGTCAG GGCAACCGGA CACTATTCCG CGTGTTGATG
CCGGTTTCCA AGGAAACGGT TGATGACGAC GCTCCCTTTG CGAAATCCGT GGGAAGATCA
AGATGA
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| Protein sequence | MSNEPKPGDS NILAMAVLNA IQNPVVMVNG EGHIVFANWE AEAFFGASAS HLARHKISTF
IPFGSPLLEL IDQVRERRAP VNEYRVDLSS PRLGQDKLVD LYVAPVTVEP GAVVVVFQER
SMADKIDRQL THRAAARSVT GLASMLAHEI KNPLSGIRGA AQLLESSVPP EDRSLTRLIC
DETDRIVSLV DRMEIFSDER PVDRTSINIH SVLDHVKAIA QAGFARHLKI TESYDPSLPP
VFANRDQLVQ VFLNLIKNAA EAVGDRADGE IQLTTAYRPG IRLSVAGSRE KISLPLEFCV
ADNGPGVPSD LLPHLFDPFI TTKTNGSGLG LALVAKIIGG HGGIVECDSQ GNRTLFRVLM
PVSKETVDDD APFAKSVGRS R
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