| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2127 |
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| Symbol | |
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| ID | 7387848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1742263 |
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| End bp | 1743588 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651328 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002549523 |
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| Protein GI | 222148566 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTC CCTCGACCAA TGACAACGTA GCCACCCATA AACCTCTTCA AGGCAAGGAA
CTGCGCAAGA TCATGCTGGC CAGCGTGATC GGCACCACCA TCGAGTGGTA CGACCTGTTC
ATTTTCGCCA CCGCCTCGGC TCTGGTGTTC AACAAGGTGT TCTTTCCCAG CGTCGATCCG
CTGGTGGGTA CGCTGCTGGC TTTCAGCACC TTCGCCTCGG CCTATCTGTC GCGCATGGTG
GGCGCAGCCC TTTTCGGCCA TTTCGGCGAC AGGCTGGGGC GAAAATCGAC ATTGATGCTA
TCGTTGAGCC TGATGGGTCT TGCCACATTC GCCATCGGCC TTTTGCCCGG CTATGAAACA
CTCGGAGTAT GGGCGCCTGT TCTCCTCGTC GTGCTGCGGC TTTTGCAGGG GCTGGCGCTG
GGTGGCGAAT GGGGCGGGGC TGTGCTTCTG GCGGTGGAAC ATGCACCGCA AAACAAGCGT
GGGCTTTACG GGTCCTGGGT GCAGATCGGC GTTCCCGCTG GTACGTTTCT GGCCAATTCC
GCCTTCCTGG TCTTATCCTC GGTTCTCTCG GAACAAAGCT TCCTGCTCTG GGGTTGGCGG
GTGGCGTTTC TAATCAGCAT CGTGCTCGTC GCCATCGGGT TCTACGTGCG CATGTCGGTG
AGCGAAACGC CAGCATTCGC CCGCCACAGA CAGCAGGCAG AGACGCAGCG CCTGCCGCTC
GCCGATCTCA TGCGGCGGCA TTGGGCAAAG GTTCTGCTTG GCGGCTTCGC CACCCTATCC
ATCGGCTCGT CTTTCAATCT GATCGCGGTA TTCGGCCTGT CCTATGGTAC GCAGACGCTG
CATTTTCCCA AGCAGCAGGT CTTGGCGATG ATCCTGATCG CCTGCGCGGT CTGTGTTGTC
CTTCTACCGC TGTTTGGCGC ACTTTCGGAC CGGGTCGGCC GCCGGAATGT CATTCTCGCC
GGGATCTTTG CGGAAATCCT GTTTGCCTTC CCGATGTTCT GGCTGATGAA CCATGGCGGT
TTGCCGGGCG TGCTCCTCGG CTTCCTGCTG ATGATGACAG CCTTTGCCGC CAATTTCGGA
CCGATTGCCA CCTTTCTGTC AGAACTGTTC GAGACCGGCG TGCGCTATAC CGGCCTGTCG
ATCTGCTACA TGCTGGCTGG CGTGCTGGGC AGCGCAATGA CCCCGATCAT CACCGCCTGG
CTGGTGGCAA CGACCGGCAG CGCCGCGTCC GTAGCGTGGT ATATCATGGG AGCCTCCGCC
GTTTCCGCAG CGACTTTGCT GATCCTCTCC AGCAGCAGGC AACCAGCGGC AGCGTTTGCG
GCATAA
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| Protein sequence | MAAPSTNDNV ATHKPLQGKE LRKIMLASVI GTTIEWYDLF IFATASALVF NKVFFPSVDP
LVGTLLAFST FASAYLSRMV GAALFGHFGD RLGRKSTLML SLSLMGLATF AIGLLPGYET
LGVWAPVLLV VLRLLQGLAL GGEWGGAVLL AVEHAPQNKR GLYGSWVQIG VPAGTFLANS
AFLVLSSVLS EQSFLLWGWR VAFLISIVLV AIGFYVRMSV SETPAFARHR QQAETQRLPL
ADLMRRHWAK VLLGGFATLS IGSSFNLIAV FGLSYGTQTL HFPKQQVLAM ILIACAVCVV
LLPLFGALSD RVGRRNVILA GIFAEILFAF PMFWLMNHGG LPGVLLGFLL MMTAFAANFG
PIATFLSELF ETGVRYTGLS ICYMLAGVLG SAMTPIITAW LVATTGSAAS VAWYIMGASA
VSAATLLILS SSRQPAAAFA A
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