| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2092 |
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| Symbol | ccoN |
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| ID | 7386894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1714386 |
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| End bp | 1716035 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651303 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_002549498 |
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| Protein GI | 222148541 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.196444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACAA TGAATTATAC TTTCGAAACC ATGGTTTTGG CCATTCTGGC CTTTGCCGCG
CTGCTCGGGG CGGGTTTCGC CTATGACAGC CTGTTTGCTG CCCATATGTG GGTGGCCTTT
TTCGTGCTTC TGGGGGCGAC GGTCGTCATG TTGCGCCATA TCCGGTTTGC GCCGGTGACG
GCTGGCATGT CGAGTCGTGC AGCGGCGCAA CCCAAGTCTG AATATTTCGA CGAGGTCATT
CGTTATGGCG TCATCGCCAC GGTGTTCTGG GGTGTGATCG GCTTTCTTGT CGGGCTGGTC
ATCGCCCTGC AACTGGCCTT TCCCGATCTG AATTTCGGCC CCTGGCTGAA TTTCGGGCGG
CTGCGGCCAT TGCACACGTC TGCCGTGATT TTTGCCTTTG GCGGCAATGC CCTGATCATT
ACATCGTTTT ATGTGGTGCA GCGCACGTGT CGCAGCCGTT TGTTCGGCGG CACGCTCGGC
TGGTTCGTGT TCTGGGGCTA TAATTTCTTC ATCGTCATGG CTGCCACCGG CTATCTGCTC
GGGATCACCC AGGGCCGTGA ATATGCGGAA CCCGAATGGT ATGTCGATAT CTGGCTGACA
ATTGTCTGGG TCGCCTATCT CATTGCCTTC CTGGGCACGA TCCTGACCCG CAAGGAGCCG
CATATCTATG TGGCGAACTG GTTCTATCTG GCCTTCATCG TCACCATTGC CATGCTGCAT
ATCGTCAACA ATCTGGCGAT CCCGGTCTCC TTCCTCGGCG TCAAGAGCTA TTCAGCCTTC
TCCGGCGTGC AGGATGCGCT GACGCAATGG TGGTACGGGC ATAATGCCGT CGGCTTCTTC
CTGACGGCGG GCTTCCTGGG CATGATGTAC TACTTCGTGC CCAAGCAGGC CGGTCGCCCG
GTCTATTCCT ACCGGCTGTC GATCATCCAC TTCTGGGCGC TGATCTTCAT GTATATCTGG
GCCGGTCCGC ATCACCTGCA TTATACAGCG CTGCCCGATT GGGCGCAGAC GCTGGGCATG
GTGTTCTCGA TCATGCTGTG GATGCCGTCC TGGGGCGGGA TGATCAACGG GTTGATGACG
CTTTCGGGTG CCTGGGACAA GATCCGTACC GATCCGATCA TCCGGATGAT GGTCATGGCC
ATCGCCTTCT ACGGCATGTC GACTTTCGAA GGCCCGATGA TGTCGATCAA GACGGTCAAT
TCGCTCAGCC ACTATACCGA ATGGACCATT GGTCACGTTC ACTCCGGCGC ACTCGGCTGG
GTCGGCATGA TCACCTTCGG CGCGATCTAC TACTTGACGC CCAAGCTCTG GCACCGCGAC
CGCCTCTATT CGATGCGGAT GGTCAACTGG CACTTCTGGC TCGCCACGCT CGGCATCGTC
GTCTATGCCG CCGTGCTTTG GGTTGCTGGT ATACAGCAGG GCTTGATGTG GCGTGAATAC
GATGCGCAGG GCTTCCTGGT CTATTCCTTC GCGGAAACCG TCAAGGCCAT GTTCCCCTAC
TATGTCATGC GCGCCGTTGG CGGCGGGCTC TATCTCGCCG GCAGCCTGGT CATGGCCTGG
AATATCACCA TGACCATTCT CGGCCACCAG CGCAACGAGG CGCCTCTTGC AGGTTCGGCC
ATGGCGCCTG TCCTGCAACC GGCGGAGTAA
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| Protein sequence | MPTMNYTFET MVLAILAFAA LLGAGFAYDS LFAAHMWVAF FVLLGATVVM LRHIRFAPVT
AGMSSRAAAQ PKSEYFDEVI RYGVIATVFW GVIGFLVGLV IALQLAFPDL NFGPWLNFGR
LRPLHTSAVI FAFGGNALII TSFYVVQRTC RSRLFGGTLG WFVFWGYNFF IVMAATGYLL
GITQGREYAE PEWYVDIWLT IVWVAYLIAF LGTILTRKEP HIYVANWFYL AFIVTIAMLH
IVNNLAIPVS FLGVKSYSAF SGVQDALTQW WYGHNAVGFF LTAGFLGMMY YFVPKQAGRP
VYSYRLSIIH FWALIFMYIW AGPHHLHYTA LPDWAQTLGM VFSIMLWMPS WGGMINGLMT
LSGAWDKIRT DPIIRMMVMA IAFYGMSTFE GPMMSIKTVN SLSHYTEWTI GHVHSGALGW
VGMITFGAIY YLTPKLWHRD RLYSMRMVNW HFWLATLGIV VYAAVLWVAG IQQGLMWREY
DAQGFLVYSF AETVKAMFPY YVMRAVGGGL YLAGSLVMAW NITMTILGHQ RNEAPLAGSA
MAPVLQPAE
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