| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2087 |
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| Symbol | dhs |
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| ID | 7386892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1711720 |
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| End bp | 1712997 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651301 |
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| Product | 2-dehydro-3-deoxyphosphoheptonate aldolase |
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| Protein accession | YP_002549496 |
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| Protein GI | 222148539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGGCGACCT ATCCGCCGCT GGTCTTTGCT GGTGAAGCGC GCCGGTTGAA AAAGGCGCTT
GCCAATGTGG CTGATGGCAA TGGCTTCCTG CTTCAGGGCG GCGATTGTGC CGAAAGCTTT
GCCGAACACG GCGCCGACAC GATCCGCGAC TTCTTCCGCG CCTTCCTGCA GATGGCCGTT
GTCCTGACCT TTGGCGCCCA GCTTCCGGTC GTCAAGGTCG GCCGCATCGC TGGCCAGTTC
GCCAAGCCGC GCTCGTCGGA TTTCGAGCGT CAGGGCGATG TCGAGTTGCC GAGCTACCGT
GGCGATATCA TCAATGGCAT CGATTTCACC GAAGAGTCTC GCGTTCCCGA TCCGCATCGT
CAGTTGATGG CCTATCGCCA GTCAGCCGCG ACGCTGAACC TGCTGCGCGC TTTCGCCATG
GGTGGCTATG CCAATCTCGA AAACGTTCAT CAATGGATGC TGGGCTTCGT CAAGGACAGC
CCGCAGGCAG AGCGTTACCG CAAGCTTGCC GACCGGATTT CCGAGACCAT GGATTTCATG
AAGGCGGTCG GCATCACGGC GGAAACCAAT GCCAGCCTGC GCGAAACCGA TTTCTTCACC
AGCCATGAAG CGCTGCTTCT TGGCTATGAA GAGGCGCTGA CCCGCGTCGA CTCGACATCT
GGCGATCATT ACGCCACATC AGGCCACATG ATCTGGATTG GCGACCGTAC CCGTCAGGCC
GATCATGCCC ATATCGAATA TTGCCGCGGA ATCAAAAACC CGCTGGGTCT CAAATGCGGC
CCGTCGCTTC AGGCTGACGA TCTTCTCAAC CTGATCGACA TTCTCAATCC GCAAAATGAA
GCGGGTCGTC TGACGCTGAT CTGCCGCTTC GGCCACGACA AGGTTGCTGA CCATCTGCCG
CGCCTGATCC GCGCGGTGGA GCGGGAAGGG CGCAAGGTCG TATGGTCCTG CGATCCGATG
CATGGCAACA CCATCACGCT CAACCACTAC AAGACCCGGC CCTTTGACCG GATCCTGTCG
GAAGTGGAAA GCTTCTTCCA GATCCACCGG GCTGAAGGCT CGCATCCAGG CGGCATCCAT
ATCGAGATGA CCGGCAACGA CGTGACCGAA TGCACCGGTG GCGCACGCGC CGTTTCCGCT
GAAGATTTGC AGGATCGCTA CCATACCCAT TGCGACCCGC GTCTCAATGC GGACCAGGCG
CTGGAACTGG CCTTCCTTCT GGCCGAGCGC ATGAAGGGCG GACGCGACGA GAAGCGGCTG
AGAACAGTCG GGGCCTGA
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| Protein sequence | MATYPPLVFA GEARRLKKAL ANVADGNGFL LQGGDCAESF AEHGADTIRD FFRAFLQMAV
VLTFGAQLPV VKVGRIAGQF AKPRSSDFER QGDVELPSYR GDIINGIDFT EESRVPDPHR
QLMAYRQSAA TLNLLRAFAM GGYANLENVH QWMLGFVKDS PQAERYRKLA DRISETMDFM
KAVGITAETN ASLRETDFFT SHEALLLGYE EALTRVDSTS GDHYATSGHM IWIGDRTRQA
DHAHIEYCRG IKNPLGLKCG PSLQADDLLN LIDILNPQNE AGRLTLICRF GHDKVADHLP
RLIRAVEREG RKVVWSCDPM HGNTITLNHY KTRPFDRILS EVESFFQIHR AEGSHPGGIH
IEMTGNDVTE CTGGARAVSA EDLQDRYHTH CDPRLNADQA LELAFLLAER MKGGRDEKRL
RTVGA
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