| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2081 |
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| Symbol | rpiA |
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| ID | 7386889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1708377 |
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| End bp | 1709075 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651298 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_002549493 |
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| Protein GI | 222148536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.627324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTTC GTCAAATGAA GATCAAAGCC GCGGAACTGG CTTTGTCTTA TGTCGAAAAT
GGGATGCGTC TCGGCATCGG CACTGGCTCG ACCGCAGAGG AGTTCGTGCG GTTGCTGGCT
GAAAAGGTCG CCGACGGTTT CAAGGTTCAA GGCGTGCCAA CGTCGGAGCG CACCGCAAGG
CTTTGCCTGG AACTGGGCGT GCCGCTGATG TCGCTCGATG AATTGCCGGA ACTGGACCTA
ACCGTCGATG GCGCCGATGA GCTTGATCGT CACCTGACCC TGATCAAGGG CGGCGGCGGT
GCGCTGCTGC GCGAAAAGAT CGTTGCTGCC GCCTCGTCGC GGGTGATCGT CATTGCCGAC
GAAACAAAGC TGGTGGAGAC GCTCGGCGCT TATCCGCTGC CCATCGAGAT CAATGGATTC
GGTGGCATTG CAACCCGGAT CTCCATCGAA AAGGCTGCCG CCAAACTGGG CCTGTCGGGG
ACGATTGGCC TGCGCATGTC TGGTGACGAT CTGTTTATGA CAGATGGTGG GCATTATATT
CTCGATGCTT CTTTTGGCCG CATTCCTGAT GCAGTGGCCC TTTCTCAGGC ATTGCATGCT
ATACCCGGGG TGGTGGAGCA CGGTCTGTTC ATCGGAATGG CATCGCTGGC CGTCGTGGCT
GGCTCTGATG GTGCGCGGGT GATCGAGCCT GTGGCGTGA
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| Protein sequence | MDVRQMKIKA AELALSYVEN GMRLGIGTGS TAEEFVRLLA EKVADGFKVQ GVPTSERTAR
LCLELGVPLM SLDELPELDL TVDGADELDR HLTLIKGGGG ALLREKIVAA ASSRVIVIAD
ETKLVETLGA YPLPIEINGF GGIATRISIE KAAAKLGLSG TIGLRMSGDD LFMTDGGHYI
LDASFGRIPD AVALSQALHA IPGVVEHGLF IGMASLAVVA GSDGARVIEP VA
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