| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2076 |
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| Symbol | |
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| ID | 7386885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1702011 |
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| End bp | 1703615 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651294 |
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| Product | fumarate hydratase protein class I |
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| Protein accession | YP_002549489 |
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| Protein GI | 222148532 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG ATCTCTTTCC CCTTGGCGAA GACACGACTC CCTACCGCAA ACTGACCGCC
GATTACGTCT CGGTCGAAAC CTTCAAGGGC CAGGAGATCC TGACCGTTGA TCCGGAGGGC
CTGCGGCTTC TGGCCGAAAC CGCGCTTTCC GACATCAACC ACCTACTGCG TCCGGGCCAT
CTCAAGCAAT TGGCCTCCAT TCTCCAGGAC CCGGAAGCCA CCGACAATGA CCGTTTCGTG
GCCTATGACC TGTTGAAAAA CGCCAATATC GCTGCTGGCG GTGTGCTACC GATGTGCCAG
GATACCGGCA CCGCCATCGT CATGGGCAAG AAGGGCCGCC GCGTCTGGAC GGATGGCGGC
GATTATGAGG CTTTGGCCCA TGGCGTGCGC GATGCCTATG AAAAGCGTAA CCTGCGCTAT
TCGCAGCTGG CGCCCTTGAA AATGTTCGAG GAAAAGAACA CCAAGACAAA CCTGCCCGCC
CAGATCGATC TCTATGAAGA GGGCGAGGAT GCCTATAAAT TCCTGTTCAT GGCCAAGGGC
GGCGGTTCGG CCAACAAGAC CTTCCTTTAC CAGGGCACGC CTTCGCTGCT GACCCATGAC
CGAATGATCG ATTTCCTGAA GGACAAAATC CTGTCGCTCG GCACGGCAGC CTGTCCCCCC
TACCATCTGG CGATCGTCAT CGGCGGGCTT TCGGCGGAAA TGAACCTGAA GACGGTGAAG
CTCGCCTCGG CCCGCTATCT CGATGCCCTG CCCACCGAAG GTTCCGAAAG CGGCCACGCC
TTCCGTGATA TCGAGATGGA ACAGGAAATC CACAAGCTGA CGCAATCGCT CGGCGTCGGC
GCCCAGTTCG GCGGCAAATA TTTCTGTCAT GACGTGCGGG TCATCCGGCT GCCGCGCCAT
GGCGCCTCGC TGCCGATTGG CCTTGGTGTC TCGTGTTCCG CCGACCGTCA GGCAATGGGC
AAGATTACCC GCGACGGGAT CTTTATCGAG CAGCTGGAAA CCGATCCGTC GAAATACATG
CCTGACATCG ATGAGGCCGC CCTCTCCTCC TCCACGGTCA GCATCGACCT TAACCAGCCA
ATGAGCGCCA TCCTGGCCGA ACTGACGAAG CATCCCGTCA AGACCCGGCT GTCGCTGACC
GGCACGATCA TCGTCGCCCG CGATCTGGCG CATTCCAAGA TCCGCGAACG GCTCGAAAAC
GGCGAAGGCA TGCCAGACTA TATGAAAAAC CATCCGGTCT ATTATGCCGG TCCCGCCAAG
ACGCCGGAAG GCTTTGCCTC CGGTTCCTTC GGTCCAACCA CGGCTGGCCG TATGGATAGC
TATGTGGACC AGTTCCAGTC GTTTGGCGGT TCCATGGTCA TGCTGGCCAA GGGCAATCGC
TCACGCGCCG TACGTGAAGC CTGCAAGACC CATGGTGGTT TCTACCTCGG CTCCATCGGT
GGCCCGGCAG CCCGGCTTGC CCAGGACTGC ATCCGCCATG TTGAAGTGCT GGAATATCCG
GAACTCGGCA TGGAAGCCGT CTGGAAGATC GAGGTCGAAA ACTTTCCGGC CTTCATCGTC
ACTGACGACA AGGGCAACGA TTTCTTCCAG GAATTCAACC TCTGA
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| Protein sequence | MADDLFPLGE DTTPYRKLTA DYVSVETFKG QEILTVDPEG LRLLAETALS DINHLLRPGH
LKQLASILQD PEATDNDRFV AYDLLKNANI AAGGVLPMCQ DTGTAIVMGK KGRRVWTDGG
DYEALAHGVR DAYEKRNLRY SQLAPLKMFE EKNTKTNLPA QIDLYEEGED AYKFLFMAKG
GGSANKTFLY QGTPSLLTHD RMIDFLKDKI LSLGTAACPP YHLAIVIGGL SAEMNLKTVK
LASARYLDAL PTEGSESGHA FRDIEMEQEI HKLTQSLGVG AQFGGKYFCH DVRVIRLPRH
GASLPIGLGV SCSADRQAMG KITRDGIFIE QLETDPSKYM PDIDEAALSS STVSIDLNQP
MSAILAELTK HPVKTRLSLT GTIIVARDLA HSKIRERLEN GEGMPDYMKN HPVYYAGPAK
TPEGFASGSF GPTTAGRMDS YVDQFQSFGG SMVMLAKGNR SRAVREACKT HGGFYLGSIG
GPAARLAQDC IRHVEVLEYP ELGMEAVWKI EVENFPAFIV TDDKGNDFFQ EFNL
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