| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2064 |
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| Symbol | |
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| ID | 7386875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1691310 |
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| End bp | 1692140 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643651284 |
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| Product | ABC transporter membrane spanning protein (amino acid) |
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| Protein accession | YP_002549479 |
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| Protein GI | 222148522 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACA GCCTCGAACT GATCCCGCCG CGCCCTGCCC CGCCAAGACA TGAGCATCGC
GTTACCCCTG GCAGGGTGTT GGGCGGTTCC TTGCTGCTGG TCTGGGGATT GCTTGGCCTT
GGCCTGCTGG CGATGATGAT CGGCAATTGG GACCAGGAGA AATTCGTCAA ATACGGCCCG
CGTTTTCTCT CTGGCCTTGG GACGACGCTC AGCATCGTCG CCATCTCGAT TGCCGCCGGT
GCAGTCCTCT CTATCCCGAT CGCCTTTGGG CGGATGTCGA AAAACCGTCT GGCCAATGCC
GCGACCTATG CCTATGTCTA TGTCTTTCGC GGTACACCGC TGCTGGCGCA GGTGTTTCTG
GTCTATTACG GCTTGGGCGG GTTCCGGGCG GAATTCGAGG CTGTCGGCCT CTGGTGGTTC
TTCCGCGATG CCTGGTATTG CGGCTTGCTG GCATTGTCGC TGAACACGGC AGCCTATCAG
GCAGAGATCC TGCGCGGCGC GATCCGCAGC GTTGGACGCG GCCAGCATGA AGGTGCCGCT
TCGCTGGGCC TGCCGCGCAC CGTCACGTTC TGGAAAATCA TTCTGCCGCA GGCGCTGATC
GTGGCGCTCC GGCCCTATGG CAATGAAATC ATCCTGATGG TCAAGGGCTC GGCCATCCTG
TCGATCATCA CCGTTCTCGA CATGATGGGC GAGACCCGCT ACGCCTTCTC GCGCACCTTC
GACTACCAGA CCTATCTCTG GGCGGCGATC TTCTATCTCG CCATTGTCGA GATCCTGCGC
CATGGTTGGG CCGCTATTGA GACACGGCTG ACGCGCCATC TCAAACGATG A
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| Protein sequence | MSHSLELIPP RPAPPRHEHR VTPGRVLGGS LLLVWGLLGL GLLAMMIGNW DQEKFVKYGP
RFLSGLGTTL SIVAISIAAG AVLSIPIAFG RMSKNRLANA ATYAYVYVFR GTPLLAQVFL
VYYGLGGFRA EFEAVGLWWF FRDAWYCGLL ALSLNTAAYQ AEILRGAIRS VGRGQHEGAA
SLGLPRTVTF WKIILPQALI VALRPYGNEI ILMVKGSAIL SIITVLDMMG ETRYAFSRTF
DYQTYLWAAI FYLAIVEILR HGWAAIETRL TRHLKR
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