| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2057 |
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| Symbol | mmsB |
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| ID | 7386871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1687834 |
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| End bp | 1688703 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651280 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_002549475 |
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| Protein GI | 222148518 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.21364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGG TGGCATTCAT CGGATTGGGC GTCATGGGCT ATCCCATGGC CGGACACCTG
AAGGCGAAGG GCGGCCATGA TGTGACGGTC TATAACCGCA CCACGGCCAA GGCCGAAAGC
TGGGTAGCCC AGCACGGCGG GTCGCTTGGC CTGACACCGG CAGCAGCTGC GATGGGTGCT
GATTTCGTGT TCACCTGCGT CGGCAATGAC GATGACCTGC GTGCCGTCAC CATTGGCGCC
GATGGCGTGT TTGCCAGCAT GAAACCCGGT GCGATATTGA TCGACAACAC CACGGCCTCA
GCGGACGTGG CCCGCGAACT CTATCAGGCT GCAAAGGCCA AAGGCTTTGA CTTCATCGAT
GCGCCGGTGT CCGGCGGCCA GGCTGGAGCG GAAAATGGTG TGTTGACCGT GATGTGCGGT
GGCGACGAAC CGTTATTCGA ACAGGCCCGC CCGGTGATCG ACGCCTATGC ACGGATGATC
GGCCTGATGG GGCCAGCGGG TTCTGGCCAG TTGACCAAGA TGATCAACCA GATCTGCATT
GCCGGCATCG TGCAGGGGTT GGCTGAGGGC GTGCATTTCG GCAAGCGGGC CGGTCTCGAC
ATCGAAAAGG TTATCGAGGT GATTTCCAAG GGGGCTGCCG GTTCCTGGCA GATGGAAAAC
CGCCACAAGA CCATGGCCGT CGGTAAATAT GATTTCGGCT TTGCCGTCGA TTGGATGCGC
AAGGATCTGG GCATCGTGCT GAACGAAGCC AAAACCAATG GCGCCACCCT GCCTCTCACC
GCCCTGGTGG ACCAGTTCTA CGGCGACGTT CAGAAGCTTG GTGGCAATCG CTGGGATACA
TCGTCGCTGC TGGCCCGGCT GGAAAAATAA
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| Protein sequence | MAKVAFIGLG VMGYPMAGHL KAKGGHDVTV YNRTTAKAES WVAQHGGSLG LTPAAAAMGA
DFVFTCVGND DDLRAVTIGA DGVFASMKPG AILIDNTTAS ADVARELYQA AKAKGFDFID
APVSGGQAGA ENGVLTVMCG GDEPLFEQAR PVIDAYARMI GLMGPAGSGQ LTKMINQICI
AGIVQGLAEG VHFGKRAGLD IEKVIEVISK GAAGSWQMEN RHKTMAVGKY DFGFAVDWMR
KDLGIVLNEA KTNGATLPLT ALVDQFYGDV QKLGGNRWDT SSLLARLEK
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