Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_2043 |
Symbol | |
ID | 7386860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1678146 |
End bp | 1678730 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643651268 |
Product | transcriptional regulatory protein |
Protein accession | YP_002549464 |
Protein GI | 222148507 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2169] Adenosine deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTGG ATATTTCCAT ATGCGAGCAA GCGTGGCTGG CACGTAACCC TGATTTCGAC GGACGATTTT TCATCGGCGT TCGAACCACA GGGGTGTATT GCCGTTGCGT GTGCCCCGTG CGCCTTCCCT ATCGCTGCAA CGTCGAATTC CTGCCAAGTG CAACCGCGGC TGAACTGGCG GGCTATAGGC CCTGTTTGCG CTGTCGGCCG GAAACCGCGC CATTTTGTCC TGCCTGGAAA GGAAGTGCGA CGATTGTGGA AAGGGCCGCC AGACTTATAA GAGACGAAGG AGCCCTAGAT GCACGAGAAG CAACAGTAGA AATGCTTGCC GAGTGCGTCG GAGTCGGCGC ACGACATCTT ACCCGCCTGT TCCAGAAACA TCTTGGAGCA AGCCCTATTC AGGTGGCTAA AACAGCCCGC GTGCAACGCG CAAAACGCCT CATCACCGAA ACGGACCTGC CGATCACTGA CATCGCTCTA CAATCCGGCT TCACAAGCCT CAGACGCTTT AATGCAGTTT TTCAGGAGGT CTATAAGCGC CCGCCAACAG CCATCAAACG AGCATCTCGG GTGCAAAATT CATAG
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Protein sequence | MSLDISICEQ AWLARNPDFD GRFFIGVRTT GVYCRCVCPV RLPYRCNVEF LPSATAAELA GYRPCLRCRP ETAPFCPAWK GSATIVERAA RLIRDEGALD AREATVEMLA ECVGVGARHL TRLFQKHLGA SPIQVAKTAR VQRAKRLITE TDLPITDIAL QSGFTSLRRF NAVFQEVYKR PPTAIKRASR VQNS
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