| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2042 |
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| Symbol | |
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| ID | 7386859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1677382 |
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| End bp | 1678068 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651267 |
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| Product | nitroreductase |
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| Protein accession | YP_002549463 |
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| Protein GI | 222148506 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0778] Nitroreductase |
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| TIGRFAM ID | [TIGR02476] cob(II)yrinic acid a,c-diamide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.335823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGACT TAGTGAACGA TGCTCTGGTG TCTGCCGGAG CTTTTTCTGC CGAAGAACGC
GCCGCCGTCT ACCGGGCCAT CATGACCCGC CGCGACGTGC GCGATGAATT TCTGCCCGAC
CCAATCGACA ATGACACGCT CTGGCGCATC CTCACCGCCG CCCACCACGC CCCCTCCGTT
GGCTTCATGC AGCCCTGGAA CTTCGTGCTG GTGCGCGACG CAGCACGGCG ACAAGCCGTC
TGGCAAGCCT TCTCCAAGGC CAATGACGAG GCAGCACACC TGTTTAAAGG CGAAAAAGCC
ACGCTCTACC GCAATCTGAA GCTTGAGGGC ATCTTAAAAG CCCCCCTTGG CATCTGCGTC
ACCTGCGATC CCGACCGCGC AGGCCCCGTG GTGCTAGGCC GAACCCACAA CCCCCGTATG
GACAGCTATT CCACCGTCTG CGCCATCCAA AACCTCTGGC TCGCTGCCCG CGCAGAAGGC
ATCGGCGTCG GCTGGGTCAG CATTTTCCAC GATGCCGATT TGCGGGCTAT TCTCAATATT
CCAGAGCGGA TTGAGATTGT GGGGTGGCTG TGCTTGGGCA AGGTGGCCGA GCTTTATGAT
GAGCCGGAAT TGCAGGTAAA AGGCTGGCGC AAGCGGCTGG CTCTCGAAGA TTTGGTGTTT
GATGAGGGGT GGCAAGGTGC CGGATGA
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| Protein sequence | MQDLVNDALV SAGAFSAEER AAVYRAIMTR RDVRDEFLPD PIDNDTLWRI LTAAHHAPSV
GFMQPWNFVL VRDAARRQAV WQAFSKANDE AAHLFKGEKA TLYRNLKLEG ILKAPLGICV
TCDPDRAGPV VLGRTHNPRM DSYSTVCAIQ NLWLAARAEG IGVGWVSIFH DADLRAILNI
PERIEIVGWL CLGKVAELYD EPELQVKGWR KRLALEDLVF DEGWQGAG
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