| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2040 |
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| Symbol | nadE |
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| ID | 7386857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1674583 |
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| End bp | 1676262 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651265 |
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| Product | NAD synthetase |
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| Protein accession | YP_002549461 |
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| Protein GI | 222148504 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.105391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA TAGTCCAAAG ACCCGAAACG CTGCGCATTG CCGTGGCTCA GTTCAATCCG
ACCGTGGGCG ATGTGGTTGG CAATCTCAGC CTTGCCCGCA CCGCCCGCGC CAAGGCGGCC
TCGCTGGGGG CTGATCTTCT GTTGCTGTCC GAGCTGTTCA TTTCCGGCTA TCCGCCGGAA
GATTTGGTGC TGAAACCCGC CTTTCTTCAG GCCTGCAAGG CGGCTGTGGA GGAACTGGCC
GCCGATACCG CCGATGGCGG GCCGGGCGTC ATCATCGGCT TTCCCCGCCA GGGCGATAAA
GGCCGACACA ATTCGGTGGC GATCATCGAC GGCGGCAAAA TCCTCGGTCT GCGCGACAAG
ATCGACCTGC CCAATTACGG CGAATTTGAT GAGAAGCGGG TGTTTGTCGA AGGCGATATG
CCGGGACCGG TGAACTTCCG GGGTGTCCGG CTGGGCGTTC CGATCTGCGA GGAAATCTGG
AACGATCTCG GCGTTTGCGA GACGCTGGCC GAAAGCGGTG CGGAAATTCT GCTGGTTCCC
AATGGGTCGC CCTATTATCA CGGCAAGCTT GAGGTTCGGT ATCAGGTCGT TCTGCGCCAG
GTGATCGAAA GCGGCTTGCC GCTGGTCTTC GCCAATCAGG TTGGCGGCCA GGACGAACTG
GTGTTTGATG GTGCCAGCTT CTGCTTCAAT GCCGACAAGA CGCTGGCTTT CCAGATGCCG
CAGTTCGAGG AAAGCATCGT GCTGACCACC TGGACGCGGG AAGCCGATGG CTGGCGCTGT
GCGCCCGGCG AGGTCTCAGC TATCCCCGAA GGCGAAGAGG CGGATTACCG GGCCTGCATG
TTGGGCTTTC GCGATTACGT GAACAAAAAC GGCTTCAAGA GCGTGGTTCT CGGCCTGTCC
GGTGGCATCG ATTCGGCGAT TTGTGCGGCA ATGGCTGTGG ATGCCCTGGG GCATGAGCGG
GTGCGCACCA TCATGCTGCC CTATCGCTAC ACATCCGAGG AAAGCTTCAA GGATGCTGCC
GATTGCGCCA AGGCGCTTGG CTGCCATTAT GACATCGTGC CGATTTCAGA GCCGGTGGAG
GGCTTCCTTG CCAGCCTCGC CGATATGTTT GAAGGCACGG AAAGCGGCAT TACCGAGGAA
AACCTGCAAA GCCGCACCCG TGGCACCATC CTGATGGCGG TATCGAACAA GTTCGGCTCG
ATGGTGGTGA CGACGGGCAA TAAGTCGGAA ATGTCGGTGG GCTATGCGAC GCTCTATGGC
GACATGAACG GCGGCTTCAA TCCCATCAAG GACCTCTACA AGATGCAGGT CTATGCGCTG
TCTGCCTGGC GCAATGCGCA TGTGCCAGTG GGTGCGTTGG GACCTGCGGG GGAGGTCATT
CCGGCCAACA TCATCGCCAA GGCGCCATCC GCAGAACTGC GCCCCGACCA GAAGGACCAG
GACAGTCTGC CGCCCTATCC GGTGCTGGAT GACATCTTGG AATGCCTGGT GGAAAAGGAA
ATGTCGGTGG ACGAGATTTT GGGCCGTGGC CATGATATCG CCACTGTGCA TCGTGTTGAA
CATCTGCTTT ATCTGGCCGA ATACAAGCGC CGCCAGTCAG CTCCGGGCGT GAAGATTACC
AAGAAGAACT TTGGCCGCGA CCGGCGCTAT CCGATCACCA ATCGGTTCCG AGATAGGTAG
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| Protein sequence | MSDIVQRPET LRIAVAQFNP TVGDVVGNLS LARTARAKAA SLGADLLLLS ELFISGYPPE
DLVLKPAFLQ ACKAAVEELA ADTADGGPGV IIGFPRQGDK GRHNSVAIID GGKILGLRDK
IDLPNYGEFD EKRVFVEGDM PGPVNFRGVR LGVPICEEIW NDLGVCETLA ESGAEILLVP
NGSPYYHGKL EVRYQVVLRQ VIESGLPLVF ANQVGGQDEL VFDGASFCFN ADKTLAFQMP
QFEESIVLTT WTREADGWRC APGEVSAIPE GEEADYRACM LGFRDYVNKN GFKSVVLGLS
GGIDSAICAA MAVDALGHER VRTIMLPYRY TSEESFKDAA DCAKALGCHY DIVPISEPVE
GFLASLADMF EGTESGITEE NLQSRTRGTI LMAVSNKFGS MVVTTGNKSE MSVGYATLYG
DMNGGFNPIK DLYKMQVYAL SAWRNAHVPV GALGPAGEVI PANIIAKAPS AELRPDQKDQ
DSLPPYPVLD DILECLVEKE MSVDEILGRG HDIATVHRVE HLLYLAEYKR RQSAPGVKIT
KKNFGRDRRY PITNRFRDR
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