| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2016 |
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| Symbol | cobS |
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| ID | 7386840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1658577 |
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| End bp | 1659356 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643651248 |
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| Product | cobalamin synthase |
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| Protein accession | YP_002549444 |
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| Protein GI | 222148487 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.424584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCTGA CTGCATTTGT CGATGATCTC GCCCGTTCGC TCGGCTTCCT CAGTCGTCTG
CCGATAGCGT CGCGGTTTTT CCAAAACCAT TCCGGCGAAA TGAGCCGCAC GCCACGCGCC
TTTCCGCTGG CCGGTGCGGT CATTACCGCC CCGGCGGGCC TGTTGCTCGC CCTAATGCTG
GGCCTCGGCG CCAGCAGTAT GGTCGCCGCT TTTGCCGCAA TTGGTTTGCA AGTTTTGCTG
ACCGGCGCCC TGCATGAGGA CGGTTTTGCT GACACAGCCG ATGGCCTCGG GGGTGCCAAC
CGCGAAAGAG CGCTGGATAT CATGAAGGAC AGCCGGGTGG GAACGTTTGG GGTCTTGGCC
CTGGTTTTTG GCGTTGGTCT GCGGGTCGCG GCGCTGGCTT CGCTGGTCAA CAGTCTGTCT
CCCATCAATG TTGCGCTGGT GATGATCGGC ATAGCCGCCG TCAGCCGGGC GCTGATGGTT
TGGCATTGGC ATGCCCTGCC CCCGGCAAAA CCCGATGGCG TCGCCGCATC ACTTGGCAAG
CCGGAGGATA ACACCCTGTA TACAGCCCTG TTCCTCGGCT TAGCCGTCGC GGTTGTCACC
ATCGCGCCGG TTACCTCTTT TCATCCGCTG GCGGTCATGC TTGTCGCAAG TGGCGCGGCG
GCCTTCGCGT CCAATCGGCT GGTCTCGCAC AGGCTAGGCG GCCAGACTGG CGATACCATA
GGCGCTACCC AACAGATTTG TGAAATCACC GCGCTGGCCA GCATCGCCAT GGCCTTGTAG
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| Protein sequence | MTLTAFVDDL ARSLGFLSRL PIASRFFQNH SGEMSRTPRA FPLAGAVITA PAGLLLALML
GLGASSMVAA FAAIGLQVLL TGALHEDGFA DTADGLGGAN RERALDIMKD SRVGTFGVLA
LVFGVGLRVA ALASLVNSLS PINVALVMIG IAAVSRALMV WHWHALPPAK PDGVAASLGK
PEDNTLYTAL FLGLAVAVVT IAPVTSFHPL AVMLVASGAA AFASNRLVSH RLGGQTGDTI
GATQQICEIT ALASIAMAL
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