| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2010 |
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| Symbol | |
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| ID | 7386836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1652280 |
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| End bp | 1654316 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643651242 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549438 |
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| Protein GI | 222148481 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3551] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGGAA ATGCCATGTC TGATGTTGTT ATGGTACTGG GTATGCATCG GACCGGCACA
AGCTCGGTTG CCGGTACCTT GGTTAAGCTG GGAGGGGGCG CCCCTCAGCA CTTGATGCCA
AATAGCGCAT TTAATGAGCG CGGTTATTTT GAATCCAATG TCATTGCCCA GCTAAACGAT
GAAATTCTAG CGTCTGCTGG GACCCGGTGG GATGATTGGC GCGAATTCAA TCCAGATTGG
TATAACAGCA CCGTCGCACG GAGTTTTCAA GCGAGAGCAA GAGAAGCTTT TGCTGAAGAG
TTCGACACGG CCTTGCTTCC AGTTATTAAA GACCCACGCA TCTGTCGGTT CTTTCCGTTT
TGGCGGCAGG TTCTTGAGGG AATGGGGAAA ACAGTTCATG TCGTTATGCC CTTGCGGTCT
CCATGGGATA CGGCAAAATC GTTGAACTAC CGCAACAAGA TGCACATGAC GCATGTCATA
ATGCTCTGGC TGCGGCATGT TCTGGATGCC GAGGCCGAAA CCAGAGATCT TCCACGCGCC
ATTTTCACCT GGCAAGACTT CCTCGGCAAC TGGCGTGGCA CATGCGATAC TATTTCAGCC
GAAACTGGTC TCACTTGGCC GCGCCTTTCG GATAGGTCCA TTGCTGAAGT GGAAAATTTC
CTCTCGCGAG ACTTACAACA CCATGCGTCT GAAGAAAAAA CCTTTGCCCA ACTGCGGCAG
GTCAATCATT GGGCTATGGA AACCTATGAA GCCTTAAAGG AACTCTCTAA ATCGCCACAG
TCAAAGGCAG CGCGGACAGC GCTGACTGAT GTAAGAGAGG CATTCAACAA TTCAGGTGCA
ATTTTCGGTC GCCTGCTCAT CGAATATGAA ATCAGCATAG AGGAAACAAA CCGCTCTTTG
GAAGCGGCTG TCCGAGACCG CGACGCCTTG CAAAATGCGC AAAATGACAG TGACGCTCAT
CATACAAACA AGCTCAATGA GCTAGAAGGC ACACTTGAAC ACGTAAGGAA TGAGAGGCAG
CATCTTGAAA CTGAATTGGA AGCCGCACGC CAGACTTCTG AGACACTGAT TCTTGAGCGC
GATGCTATAG AGCAAAACTC AAATCACTCT CTCGCTCGTA TCGCGGAGCT TCAGGAAACG
CTAGAGCATG CCAATAAGGA CCGGCAACGC CTCGAAGAGG AACTAACTAG CGCTCAGACA
GAATGTCAAC AGCTGATGTC TCGGGTCGAC GTTCTCGCGG ACGAGCTACA AACAGCGATG
GAGGCCTGCG TTAACCTACA AGCAGATCGA GATCAGCGCG ATCATGATCT GACGAAACTA
GAGGCCCAAG TCAACGTATT GCAGCACGAC CTTGTAAACC GGGAGTCGGA GGTTACCGTG
TTGCGAGAGG AACTAGCAGG CCGAGACGCA CAGACCAAAG AACTGCGGGA AGAACTGGCA
GGCCGAGACG CACAGACCAA AGCACTGCAG GAAGAACTGG TAGGCCGAGA CGCACAGACC
AAAGCACTGC AGGAAGAACT GGCAGGCCAA GACGGGCAAA ATACTCGACT GAAAGAGGAC
TTGATAAATG TTCAATCTGC GCTGGCGGCA TCAAAAAAGC GGCTCGAGCA ATCATTTTTT
GGTAAGCTTG ATCCCGGAGC CGACAAGCGC CTAGCTCGCA AATTGCTGGC AAGCGATTTA
TTTGACTTTG ATTTCTATTG CAGTCAGCTC AAGAACGCTC TTATCACGCC GCCTTCTGCA
CCAATAGATG CTGCTTTGCA CTTCGTTAAG GCGGGCTTCT CGCAAGGCCT TTGGCCGAAC
GCATTTTTTG ATACCCATTG GTATCTGTCC CAATACGACG ATATCCGCAA TTCCGGAATC
AATCCGCTAT GGCACTACCA CATCAACGGC TGGAAGGAAC GGAGAGACCC TTCAAGGAAA
TTTTCCACTG CATTTTATCT TGCAGCCTAT CCAGATATTC AGGTTGCGAA CATCAACCCG
CTTCAGCATT TTTTGCGTCA CGGCCAGCAT GAGGGACGTT CGATCTTTCA CATCTGA
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| Protein sequence | MRGNAMSDVV MVLGMHRTGT SSVAGTLVKL GGGAPQHLMP NSAFNERGYF ESNVIAQLND
EILASAGTRW DDWREFNPDW YNSTVARSFQ ARAREAFAEE FDTALLPVIK DPRICRFFPF
WRQVLEGMGK TVHVVMPLRS PWDTAKSLNY RNKMHMTHVI MLWLRHVLDA EAETRDLPRA
IFTWQDFLGN WRGTCDTISA ETGLTWPRLS DRSIAEVENF LSRDLQHHAS EEKTFAQLRQ
VNHWAMETYE ALKELSKSPQ SKAARTALTD VREAFNNSGA IFGRLLIEYE ISIEETNRSL
EAAVRDRDAL QNAQNDSDAH HTNKLNELEG TLEHVRNERQ HLETELEAAR QTSETLILER
DAIEQNSNHS LARIAELQET LEHANKDRQR LEEELTSAQT ECQQLMSRVD VLADELQTAM
EACVNLQADR DQRDHDLTKL EAQVNVLQHD LVNRESEVTV LREELAGRDA QTKELREELA
GRDAQTKALQ EELVGRDAQT KALQEELAGQ DGQNTRLKED LINVQSALAA SKKRLEQSFF
GKLDPGADKR LARKLLASDL FDFDFYCSQL KNALITPPSA PIDAALHFVK AGFSQGLWPN
AFFDTHWYLS QYDDIRNSGI NPLWHYHING WKERRDPSRK FSTAFYLAAY PDIQVANINP
LQHFLRHGQH EGRSIFHI
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