| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2009 |
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| Symbol | |
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| ID | 7386835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1649513 |
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| End bp | 1651945 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643651241 |
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| Product | glycosyl transferase |
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| Protein accession | YP_002549437 |
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| Protein GI | 222148480 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCGGTTTTAT CGAAAAAATT GATGGTGGCA CGGTGTGGGG ATGGTCTCTC
GGTGTAAAGG GCGCAAGATC TTCGAGTATT AAAGTCTACA TAGACGGATC CTATGCTAAT
GAAATCGTTT GTGATATTAT GCGTGAGGAT GTTAACTCTT ATCACAACAT AAATATTCCT
ACAGGATTTT CTTACTCCGT CCCCAATTCG TATCGCGACG GGCAACCACA TAAAATTGAG
ATCAAATCAG ATACTGGCGT CTCACTTAAC AGCCTGATTC CCAATCAATC AGGCAGCCAA
ATTGTTTTCA ATGCTCCATC TCGTTTTTCC GGTCATGTCG ACAAAGTCAG TGCCGGAACT
GTTTCAGGTT GGGTTCTAGA AAATATCGAC GGTCGCCCCT TGAAAAAAGG CGGGGTAACT
CTGGCCATCT ACTGCAATTC GTCGCTTGTT GGGCAAGTAA TAGCGAATCA ACGCAGGCCT
GATGTCGCAC ATATTTTGAA CGGCGATACT GAGTGTGGGT TTTCGTATCC ATTGCCTCCT
TTCTTTTTAC AGCAGGACGT CCGCATAGAA GTCAAAACTG TATCTGATGG ATGGCCGCTG
ACTAATTCGC CCATTACATA TACTAGCCTT AGTAACGATG ATGGCGCTTT GATCGGTTTG
ATCCATAAAG CACTAGATAA AAACATAGCA GATCTGTGGC AGCTAAATTT GAAAATTGCG
GAACATACGG AAAATTCATA TATTTCTTTA GATAGCTACA ATGACTGGGC TGTAGAGTAT
TTTGACGATT TGAACCGTCG AGTTCCAGAA CTTAAGTCAG AAAACACTCC TTTAGTAAGC
GTCATTTGCC CGGTATATCG TCCGCGATAT CGCGACTTCA AGATGGCTGT TGAGTCAGTT
CTATGTCAGA CATATAAAAA TATAGAACTT GTATTGGTCG ACGACGCCAG CAATGATCCA
GAACTTGATA TTATACTGGA CGAGTTCGCA CGTCGCGATG CTCGCGTAAA ATTAATTAAA
TCAACGAAAA ATTTAAACAT TAGTGAGGCT ACCAATGTAG CCATTGCGAA TTCTTCAGGG
GATTTGATCG CGTTTTTCGA CCATGATGAC CTGCTAGAAT TCTGCGCGAT ACAATTTATG
GTCGACGCTC TCGCCGCCAA TGATGCATTG CTGGTATATA GCGATGAAGA TAAAATCGAT
GATGCGGGAT ATTTTTCAGA GCCGAACCTT AAGTCGGACT GGAACCTGCG GCTTTTGATG
GCGCAGAACT ATGTGTGCCA CTTTTTGATT GTCAGTGCTG AAATGGTCCG CAAGGCCGGA
AAACTTCATA CAAAATATAA CGGTGCGCAG GACCATGATT TTGTGCTGAG GCTTTCTGAA
ATAATTCCAG AAAACCGGAT TTATCATATC CCCGAGATTC TTTATCATTG GAGAAAGACG
CCCAACAGCA CTGCAAGCAC AATTGACAAT AAAGAGTACG CGATCAAAGC GGGGATCGCG
GCTGTTCAAG CGTATGTCGA CAGAAATTCC ATCGCCGCAT CGGTTACCTC TCGCGGTAAC
ATGACGAATT ACGTTGTAAA TTACAAAGAA AAAAGTGAAA AAGTTTCGAT AATTATTCCG
TTTAAAGATC AAATAGATAT GACACGCAAA TGCGTATATT CTATCTTGCA AAATACGGAT
TATAAGAATT TCGACATAAT ACTCGTTAAC AATTTTTCAT TGTCTATTGA GGCTGACGGT
TTCAGAGACG AGATAGAAAA ATTAGATAAC GTCAGGATGA TGGATGCTAA TTTCGCGTTT
AACTATTCCA GGATAAACAA TTTAGCCGCT CAGAATTTGA AGGCAGATGC GTTTCTTTTT
ATGAATAATG ACGTGATTGT CAGTGATCCT ACGTGGCTGA CGGAACTTGT CGGCGAATTA
TTACGTAGCA GTGACATTGG TGCTGTTGGG TGCAAACTTC TTTACGAAAA TGGCACCGTC
CAGCACGCAG GTATTATTCT TGGCGTAAAC GGTGGCATCG CTGATCACCC TTACAAAGGA
CATGAAGCAC ATGATCCTGG CTTCATGGGG AGAGGCCTTT GCAGTCAAGA GCTTTCTGCT
GTTACCGGCG CATGTTTACT TTGCTCATCG GACGTGTTCC AGGCCGTATC AGGTTTTGAT
GAATTAAACT TTGGGGTGGC TTTTAATGAC GTTGACCTGT GCCTTAAAAT AAGAAATCTG
GGTAAGAAAG TCATTTGGCG TGCGGAGACC GTACTGGAGC ACAGAGAAAG CTTGAGCCGT
TCATCTGATC TTGAGCCTCA AAAGATTGCA CGCTTTGCTA AAGAACACGT GGCTTTCAAA
GAAAAATGGC AGGTGGTGCT AGACAATGCC CCCTACTACA ATCCGAAGTT CTCTAGAAGG
ACCGGTATAT TCAAGGCCTT AAAGCGAGTG TAG
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| Protein sequence | MKKIGFIEKI DGGTVWGWSL GVKGARSSSI KVYIDGSYAN EIVCDIMRED VNSYHNINIP
TGFSYSVPNS YRDGQPHKIE IKSDTGVSLN SLIPNQSGSQ IVFNAPSRFS GHVDKVSAGT
VSGWVLENID GRPLKKGGVT LAIYCNSSLV GQVIANQRRP DVAHILNGDT ECGFSYPLPP
FFLQQDVRIE VKTVSDGWPL TNSPITYTSL SNDDGALIGL IHKALDKNIA DLWQLNLKIA
EHTENSYISL DSYNDWAVEY FDDLNRRVPE LKSENTPLVS VICPVYRPRY RDFKMAVESV
LCQTYKNIEL VLVDDASNDP ELDIILDEFA RRDARVKLIK STKNLNISEA TNVAIANSSG
DLIAFFDHDD LLEFCAIQFM VDALAANDAL LVYSDEDKID DAGYFSEPNL KSDWNLRLLM
AQNYVCHFLI VSAEMVRKAG KLHTKYNGAQ DHDFVLRLSE IIPENRIYHI PEILYHWRKT
PNSTASTIDN KEYAIKAGIA AVQAYVDRNS IAASVTSRGN MTNYVVNYKE KSEKVSIIIP
FKDQIDMTRK CVYSILQNTD YKNFDIILVN NFSLSIEADG FRDEIEKLDN VRMMDANFAF
NYSRINNLAA QNLKADAFLF MNNDVIVSDP TWLTELVGEL LRSSDIGAVG CKLLYENGTV
QHAGIILGVN GGIADHPYKG HEAHDPGFMG RGLCSQELSA VTGACLLCSS DVFQAVSGFD
ELNFGVAFND VDLCLKIRNL GKKVIWRAET VLEHRESLSR SSDLEPQKIA RFAKEHVAFK
EKWQVVLDNA PYYNPKFSRR TGIFKALKRV
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