Gene Avi_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_2000 
Symbol 
ID7386830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1645680 
End bp1645931 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content54% 
IMG OID643651236 
Producthypothetical protein 
Protein accessionYP_002549432 
Protein GI222148475 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2026] Cytotoxic translational repressor of toxin-antitoxin stability system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TCGCATACAG CAAATCATCA TTGAAGGTTC TTCGCCGCCT GCCAACCAAT 
GAGGCAAAGC GGATTGCCCA GAAGATCGAG CAATATGCGA GCGATCCGCA GTCCATGGCG
AACAACGTAA AGGCACTGAC CGGCTCGCCT TACATCCGGT TGCGGGTCGG TGATTGGCGG
GTGATCATGG ACGATCAAGG CAGCGTCCTT GAAATCCTCA AGATCGGCCC GCGTGGTAGC
GTCTACGAAT AG
 
Protein sequence
MKKIAYSKSS LKVLRRLPTN EAKRIAQKIE QYASDPQSMA NNVKALTGSP YIRLRVGDWR 
VIMDDQGSVL EILKIGPRGS VYE