| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1986 |
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| Symbol | rfbB |
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| ID | 7387263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1631808 |
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| End bp | 1632866 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651226 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_002549422 |
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| Protein GI | 222148465 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.149951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTAC TTGTAACCGG CGGTGCCGGC TTTATCGGAT CGGCCGTTGT TCGCCATTTG
GTGCTTGAAA AAGGCTATGA CGTCCTGAAT GTCGACAAGC TCACCTATGC GGGTACCTTG
ACCTCGCTGA AATCGGTTGA GGCAAATCCG CTTTACCGGT TCCTTCAGGC CGATATCTGC
GACGGCCAGG CAATCGCCTC GGCTTTTGCA AGCTTCAAGC CCGACCGCGT CATGCATCTG
GCCGCCGAAA GCCATGTCGA CCGCTCAATT ACTGGCGCCA AGGATTTCGT CGAGACCAAT
GTGCTCGGCA CGTTCACCAT GTTGGAATGC GCCCGCGCCT ATTGGCAGGG GCTGGAAGGT
GCGAGCAAGG ACGGTTTCCG CTTCCTGCAT GTCTCGACCG ACGAAGTTTA TGGTTCGCTG
GGCGATGAGG GTCTGTTTAC CGAAACCACC CCTTATGATC CAAGCTCCCC CTATTCCGCC
TCGAAAGCCG CTTCCGACCA TCTCGCCAAG GCCTGGGCGC GCACCTATGG CCTGCCGGTG
GTGGTGTCGA ATTGCTCCAA CAATTACGGC CCCTTCCATT TTCCGGAAAA GCTCATTCCG
CTGATGATCA TCAACGCGAT GGAAGGCAAG CCTCTGCCGG TCTACGGCAA TGGCGCCAAT
ATCCGCGATT GGCTTTACGT CGAAGACCAT GCCAGGGCGC TTGATATCAT CGCGGAGCGT
GGACAGATTG GCGAAACCTA TAATGTCGGT GGCCGCAATG AGCGACGCAA TATTGAGGTC
GTCACCCGCG TCTGCGCGCT GATGGATGGC CTGCATCCGT CGGATACGCC GCATGAGAAG
CTGATCCAAT ACGTGACCGA CCGTCCCGGC CACGACGCCC GTTATGCCAT CGACGCGACG
CGGCTGGAAA CCGAACTCGG CTGGAAGGCT CAGGAAAATT TCGAGACCGG CATCGAGAAA
ACCGTGAAAT GGTATCTTGA AAACCGCTGG TGGTGGGAAC CGTTGCGCCA GGGCTATGAT
GGTAGCCGTC TTGGCCTGCT GAAAGCCGCG AGCAAATGA
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| Protein sequence | MRVLVTGGAG FIGSAVVRHL VLEKGYDVLN VDKLTYAGTL TSLKSVEANP LYRFLQADIC
DGQAIASAFA SFKPDRVMHL AAESHVDRSI TGAKDFVETN VLGTFTMLEC ARAYWQGLEG
ASKDGFRFLH VSTDEVYGSL GDEGLFTETT PYDPSSPYSA SKAASDHLAK AWARTYGLPV
VVSNCSNNYG PFHFPEKLIP LMIINAMEGK PLPVYGNGAN IRDWLYVEDH ARALDIIAER
GQIGETYNVG GRNERRNIEV VTRVCALMDG LHPSDTPHEK LIQYVTDRPG HDARYAIDAT
RLETELGWKA QENFETGIEK TVKWYLENRW WWEPLRQGYD GSRLGLLKAA SK
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