| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1950 |
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| Symbol | |
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| ID | 7388008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1611291 |
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| End bp | 1612052 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643651206 |
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| Product | polysialic acid transport protein |
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| Protein accession | YP_002549402 |
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| Protein GI | 222148445 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.440702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGCAGCAAA AGCTAAACGT GATGCATGCT GTGATCATGC GCGACATACG CAGCCGCTAC
TTTAACCACG GCCTAGGCTT CTTGATCGTG CCGCTTTTTC CTGTTGCACA TATTCTTTTG
CTTTTAACTG TATATAACGT GGTAGGAAAA AAATCTGAAT TTGGTGATGA TCTTCAGTTG
TTTTTTGCTA CTGGGCTGCT GCCTGTTATG ACTTTTATGT ATGTATCTCG ATTTATGTCC
ATATCCTTGA TTGCAAACAA ATCTATGATG TCATTTCCAG TGGTGCGGTT GCTGGATATA
GTACTGGCAA GGGCTTTTTT GGAATTTATC GGAATTGTTA TTTCATTTAT ATTAATATAT
ATATATCTTA TATCTACTGG CAGTAATCCA GTTCCTATTC ATCCTTCGGA AGCTTTGACG
GCATTCTTTT TTACAGTGAT TTTGTCAATT GGATTCGGAA TAAGCGCCAG CGTAATCTCA
GCCATTCTTC CCATTTTTCC GATGATTTAT GGATTTTCAA TGGTGGTAGT ATATCTAACC
TCAGGTGCGC CAATCTATCT TAATTCGTTT CCAGAAGTGG CTTTGCGTGC CGTTTCCTGG
AATCCAGTAT TTCATGCAGT CGAATGGGTA CGATCAGCAT ACTATCTGGG CTATCCTACC
GAATTTATTG ACAAGCAGTA TCTCATTGGA TTCTCAATTG GCAGTGTTTG CTTCGGACTG
GTTCTTGAGC GGTTGCTGCG GAGATACGCA CTTGAGAACT GA
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| Protein sequence | MQQKLNVMHA VIMRDIRSRY FNHGLGFLIV PLFPVAHILL LLTVYNVVGK KSEFGDDLQL
FFATGLLPVM TFMYVSRFMS ISLIANKSMM SFPVVRLLDI VLARAFLEFI GIVISFILIY
IYLISTGSNP VPIHPSEALT AFFFTVILSI GFGISASVIS AILPIFPMIY GFSMVVVYLT
SGAPIYLNSF PEVALRAVSW NPVFHAVEWV RSAYYLGYPT EFIDKQYLIG FSIGSVCFGL
VLERLLRRYA LEN
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