| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1935 |
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| Symbol | |
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| ID | 7387236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1602823 |
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| End bp | 1604028 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651198 |
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| Product | MFS permease |
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| Protein accession | YP_002549395 |
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| Protein GI | 222148438 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC TGGAATTCGT CTTTCTCTGC GCCGCATTGA TGGCAATGAA CGCGCTGGCG
ATCGACATCA TGCTTCCTGC CTTGCAGCAG ATCGGCGAAG CCCTCAATGT CGTCAATGAA
AATCACCGGC AATATGTCGT GACGTCATAC CTGATCGGGT TTGGCTGCGC GCAATTGATC
TATGGCCCGC TGTCGGATCG TTTCGGGCGG CGCACGCCGA TGTTGATCGG TCTCATCGTC
TATGTTCTGG CAGCACTGGC CATCACCATT GTGCCAAGCT TCGCCGGATT GCTGATCCTG
CGCTTCATCC AGGGTGCCGG CTCCGCTGGA ACCCGGGTGA TCACCATTTC CATCGTGCGC
GATGTCTACG GCGGACGCCA GATGGCGGAG GTGATGTCGC TGATCATGAT GGTTTTCATG
ATTATCCCGG TCGTCGCCCC CGGAACCGGT CAGATCATCA TGTTCTTCGG CAACTGGCAC
CTGATCTTCC TGTTCATTGC TGTTGGCGGC ATTCTCACCA GCATCTGGAT GCAGATGCGG
CTACCGGAAA CACTCGATCC CGAAAATCGA CGGGAATTCA CCCCGAAAGT TATCCTCCAG
GGCTTCAAGA TCGTCCTGAC CAACCGCATT GCCCTGTTCT ACACACTGGC AAGCACCTTC
ATCTTCGGGG CGCTGTTCGG CTTCATTAAC TCTGCTCAAC AGATCTACAT GGGCATTTAT
GGTCTGGGCG TCTGGTTTCC ATTCGCCTTT GCTGCCGTGG CGATTTTCAT GGCGCTGTCG
TCCTATGTCA ATTCGAAGCT GGTGGGCCGG ATTGGCATGC GGCGCCTGTC TCATGGCTCG
CTTCTCGGAT TCATCGCCAT CAATGCCCTT TGGCTGCTGG CCGAAACCTT CGGGCCAACA
CCATTGCCCT TCGTGGTGTT CATGACGTTC TTTGCCGTCT CAATGTTCCA GTTTGGGTGG
ATCGGCGGCA ATTTCCAGAC GCTTGCCATC GAACCGCTCG GCCATGTCGC CGGAACGGCC
TCCTCGGTCC TCGGCTTCAT TTCCACCGTC GGCGGCTCGG TTCTTGGCGC CATAGTCGGT
CAGGCCTTCG ATGGAACATC CCGCCCGCTG GTCGCAGGCT ACTTCTTCCT GGGTGTGATA
GGGTTGGTCT TCGTGCTGAT TGCCGAAAAA GGCAAGCTGT TTCAGCCGCA TAATCCAAAG
GTCTGA
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| Protein sequence | MSKLEFVFLC AALMAMNALA IDIMLPALQQ IGEALNVVNE NHRQYVVTSY LIGFGCAQLI
YGPLSDRFGR RTPMLIGLIV YVLAALAITI VPSFAGLLIL RFIQGAGSAG TRVITISIVR
DVYGGRQMAE VMSLIMMVFM IIPVVAPGTG QIIMFFGNWH LIFLFIAVGG ILTSIWMQMR
LPETLDPENR REFTPKVILQ GFKIVLTNRI ALFYTLASTF IFGALFGFIN SAQQIYMGIY
GLGVWFPFAF AAVAIFMALS SYVNSKLVGR IGMRRLSHGS LLGFIAINAL WLLAETFGPT
PLPFVVFMTF FAVSMFQFGW IGGNFQTLAI EPLGHVAGTA SSVLGFISTV GGSVLGAIVG
QAFDGTSRPL VAGYFFLGVI GLVFVLIAEK GKLFQPHNPK V
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