Gene Avi_1923 details

Gene Information

• Locus tag: Avi_1923
• ID: 7387227
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1593763
• End bp: 1594467
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 643651189
• Product: Carbonic anhydrase protein
• Protein accession: YP_002549386
• Protein GI: 222148429
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0288] Carbonic anhydrase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.764692
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATT TTTTGAAGCG CGTTTCGAGT TTTCGTGAAG ACGTATTTCC GACCCATTCG 
GGACTCTATC GTAAACTGGC CCGGGAAGGG CAGCAGCCCC AGGCCTTGAT GATTTCCTGC 
GCAGACAGCC GGGTCATGCC GGAAGTGATT ACCCAGTCCG GCCCTGGTGA ACTGTTCGTA 
TGCCGCAATG CGGGCAACAT CGTCCCGCCG TTCTCGACCA TGAATGGCGG CGTTTCCTCG 
GCCATCGAAT ATGCGGTGGT GGCGCTTGGC GTGCGTGACA TCGTCGTGTG CGGCCATTCC 
GATTGCGGCG CCATGAAGGG TCTGTGCAAT CACGAACTCC TGGCGCCGAT GCCCAATGTG 
GCCGCCTGGT TGCGCCATAG CCACGCCGCT TATTCCATCG TCTGCGAGGC CTATCCTGAT 
GATTTGCCGC ACAAGGACAA GGTGCGGGCT GTGGCAATGG AAAATGTGGT CATTCAAATC 
GATCACCTGA AGACCCACCC CTCGGTCGCC GCCAAACTCG CCACCAATGA CATTAACCTG 
CATGGCTGGT TCTTCGACAT CGAGACCGGT GAGGTGCAGG TTTATGATGG CGCGGAGAAG 
CGCTTCCTGG TGATCGAGGG TGAAAAGGCG CTGCCAGTGG CGGTTTCCGG GCGTGCCACG 
CCGCATATCA TGGCCGATCC TCTTGTAGCG GTGGCGGCGG AGTGA 

 

Protein sequence

MSDFLKRVSS FREDVFPTHS GLYRKLAREG QQPQALMISC ADSRVMPEVI TQSGPGELFV 
CRNAGNIVPP FSTMNGGVSS AIEYAVVALG VRDIVVCGHS DCGAMKGLCN HELLAPMPNV 
AAWLRHSHAA YSIVCEAYPD DLPHKDKVRA VAMENVVIQI DHLKTHPSVA AKLATNDINL 
HGWFFDIETG EVQVYDGAEK RFLVIEGEKA LPVAVSGRAT PHIMADPLVA VAAE