| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1919 |
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| Symbol | tlyC |
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| ID | 7387223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1587694 |
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| End bp | 1588986 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651185 |
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| Product | hemolysin |
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| Protein accession | YP_002549382 |
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| Protein GI | 222148425 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGCCG AAATCGTCAT TGTTGTCCTG CTCACCATCT TGAACGGCGT ATTGGCAATG
TCCGAACTGG CGGTCGTCTC CGCCCGTCCG GCGCGTCTGC GAGTTCTGGC CGAAGCCGGT
CATCGCGGTT CTGCCGTTGC CATCCGGTTG GCTGAAAATC CCGGTCGTTT TCTGTCAACC
GTGCAGATCG GTATTACCCT TGTCGGCGTT TTGTCCGGCG CATTTTCGGG AGCCACTCTC
GGTGCTCGAT TGACGCAGTG GCTTTTGCTG CAAGGCATGT CAGAGGCTCT GGCCAATACG
CTCGGCGTCG GCTGCGTCGT GGTTGGCATC ACCTATCTGT CGCTGATCGT CGGTGAGCTC
GTGCCCAAGC AGATTGCGCT GCGAAACCCT GAAATGGTCG CCTCGCGCAT GGCGGGTGCC
ATGCTGATCC TGTCCAAGGT TTCGCTGCCG CTGGTCTGGC TGCTGGACGG CTCGGGGCGG
GCGGTCCTGT CGCTGCTCGG CCAGAAGGGC GCATCGTCAG GCACGGTGAC GGATGAGGAA
ATCAAGACGG TCTTGGCCGA AGCACAAAGT GCTGGTGTCA TCGAATCGGA AGAATCACAG
ATGATTTCCG GCGTCATGCG CCTGGCGGAC CGCACTGCAC GGGGTCTTAT GACGCCGCGC
CGTGATGTCG AACTGATCAG CGTCGATGAC ACGATTGAGG AAATCCGCCA GGCGCTGCGT
GAAAGCCAGC ATTCCCGTCT GCCGGTGCGC AATGGCAATT CCGATGAAAT CGTCGGGGTC
ATGCTGGTGA AAAATTTCTA CGATGCCTTG GCCAATGGCG GCACGGTCGA CATCCGCTCG
ATTATCAGCG ATGTGCCGAT CGTATCGGAT CTGGCGGGTG CCATCGATAT CATCCAGTCG
ATCCGCAAGA CGGTTCTGCA CATGGTGCTG GTCTATGACG AATACGGCCA TTTCGAAGGC
ATTATCACGT CAGGCGATAT TCTGGAGGCG ATTACCGGTG CCTACCAGGA AGAGGGCGAG
GAAGAGCCGG CTCTGCTGAT GCGTGAGGAC GGTTCCTATC TGGTCGCCGG CTGGACGCCG
ATTGACGAAT TCATCGAGCA TATCCGTGTG CCTGTGGATG ACGACCCGGA TTTTACCACG
GTCGCAGGCT ACGTGCTGGA TGAGTTGAAA CGCATTCCGG CGCTAGGCGA AAGCTTCGTC
AAGAATGGCT GGAAATTCGA AGTCGTCGAT CTGGATGGCC GGCGCATAGA CAAGCTGCTG
GTGTCGCCAG TTCTGGCAGA CGATCCGGAT TGA
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| Protein sequence | MFAEIVIVVL LTILNGVLAM SELAVVSARP ARLRVLAEAG HRGSAVAIRL AENPGRFLST
VQIGITLVGV LSGAFSGATL GARLTQWLLL QGMSEALANT LGVGCVVVGI TYLSLIVGEL
VPKQIALRNP EMVASRMAGA MLILSKVSLP LVWLLDGSGR AVLSLLGQKG ASSGTVTDEE
IKTVLAEAQS AGVIESEESQ MISGVMRLAD RTARGLMTPR RDVELISVDD TIEEIRQALR
ESQHSRLPVR NGNSDEIVGV MLVKNFYDAL ANGGTVDIRS IISDVPIVSD LAGAIDIIQS
IRKTVLHMVL VYDEYGHFEG IITSGDILEA ITGAYQEEGE EEPALLMRED GSYLVAGWTP
IDEFIEHIRV PVDDDPDFTT VAGYVLDELK RIPALGESFV KNGWKFEVVD LDGRRIDKLL
VSPVLADDPD
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