| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1894 |
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| Symbol | |
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| ID | 7387206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1570149 |
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| End bp | 1571009 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651168 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002549365 |
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| Protein GI | 222148408 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.214916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGAACAATC AAGACAGAGA CAATCACCCG ACACAGGAAG TGCCGCCGCT CAAGGAAGGG
CGCGAAGCGG TGCTGTCCGT GCGTGGTCTG ACTGTTGGTT TCGGTGAAAA ACTGGTGCTG
GACAATCTCG ATCTCGATGT CTATCGCGGC GAAATTCTCG GTTTTGTCGG GGCTTCGGGT
GCGGGGAAAT CGGTGCTGAT GCGCACGGTG TTGAGGCTTT TGCCGCGCCA GGCCGGTCAG
ATCCATATTC TGGGCGCAGA CTACGATGCT GTCAGCGCTG CCGAGCGTTC CAATCTCGAT
ACACGTCTTG GTGTGCTGTT CCAGCATGGC GCCTTGTTTT CCGCCCTGAC GGTCAAGGAA
AACATCCAAT TGCCGATGCG GGAATATCTG AAGCTTCCGC AAGTGCTGAT GGATGAACTG
GCCTATCTGA AAATCCAGAT GGTTGGCCTT TCTGCGGATG CCGGGGACAA ATACCCCTCG
GAATTGTCCG GCGGCATGAT CAAGCGGGCG GCTTTGGCGC GTGCGCTGGC GCTTGACCCG
GACCTGGTGT TTCTCGATGA ACCGACCTCC GGCCTCGACC CAATTGGCGC TGCCGAGTTC
GATGATTTGA TTGCCCGTCT GCGCGATACG CTGGGGCTGA CCGTCTATAT GGTGACCCAT
GACCTCGACA GCCTGTTTTC GGTCTGCGAT CGCATCGCTG TGCTCGGACA GAAACGAGTC
TTGGTTGAAG GACCGTTAAC GGATATGCTC GCCTGCGACG ATGACTGGGT CAAATCCTAT
TTCCGGGGCA AACGGGCGCG CTCCATTCCC AAACATCAGG AAATGCGCGG CACCCGCGCG
ATTGCCGGCA CGATTGATTG A
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| Protein sequence | MNNQDRDNHP TQEVPPLKEG REAVLSVRGL TVGFGEKLVL DNLDLDVYRG EILGFVGASG
AGKSVLMRTV LRLLPRQAGQ IHILGADYDA VSAAERSNLD TRLGVLFQHG ALFSALTVKE
NIQLPMREYL KLPQVLMDEL AYLKIQMVGL SADAGDKYPS ELSGGMIKRA ALARALALDP
DLVFLDEPTS GLDPIGAAEF DDLIARLRDT LGLTVYMVTH DLDSLFSVCD RIAVLGQKRV
LVEGPLTDML ACDDDWVKSY FRGKRARSIP KHQEMRGTRA IAGTID
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