| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1892 |
|---|
| Symbol | |
|---|
| ID | 7387204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1567946 |
|---|
| End bp | 1568806 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643651166 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002549363 |
|---|
| Protein GI | 222148406 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGACG AAACCGAAAC GCGACATGTG AGAACCCTCT TCATTTCGGA TGTGCATCTC
GGCTCTAAGG CCGCAAAAAC TGATTTTTTG CTGGATTTTC TGCGTGTTTA CGATGCCGAC
ACCATCGTTC TGGTTGGCGA TATCGTCGAC GGCTGGCGGT TGAAACGCAG CTGGTATTGG
CCTCAGGGCT GTAATGATGT GGTGCAGAAA TTGCTGCGCA AGGCGCGCAA GGGGACAAGA
ATTGTCTATA TCCCCGGAAA TCACGACGAA TTCCTCCGGG GTTTTCCCGG AACCCATTTT
GGAGGAATCG AAGTGCTGGA CCAGATGATT CACGAGACGG CGGATAACAA GCGCTATCTG
GTTCTGCATG GCGACCAGTT CGATGTGGTG GTGCGCAATG CGCGCCTGCT CGCCTATATG
GGTGACTGGG CTTATGACAT GGCGATTGCC ATCAACGTGG TTCTGGCGGC TGTCCGCCGC
CGGATGGGCA TGCCCTATTG GTCATTTTCT GCCTGGGCCA AGCTACAGGT CAAGCATGCG
GTCAATTTTA TCGGAGAATT CCAGAAAGTC GTTGCCGACG AAGCGCGCCG CAACGACGTG
CATGGGGTGA TCTGTGGCCA TATCCATCAT GCTGTCATGG AGGATGTCGG CGGTATCCAT
TACATCAATA CCGGTGATTG GGTGGAAAGC TGCACTGCGG TGGCCGAACA TCATGACGGT
CATTTCGAAT TGATCGAATG GGGTACGCGC TATAATGCCG CTGATCAACC GCGCCTGCTG
GGTCCGCCGG AGCCGATTCG CATTTTTCCG GTGGAAAACC CCGCTGGAAC AGAAACGCAG
GCGGCACGCT GCAACGCCTA A
|
|---|
| Protein sequence | MSDETETRHV RTLFISDVHL GSKAAKTDFL LDFLRVYDAD TIVLVGDIVD GWRLKRSWYW
PQGCNDVVQK LLRKARKGTR IVYIPGNHDE FLRGFPGTHF GGIEVLDQMI HETADNKRYL
VLHGDQFDVV VRNARLLAYM GDWAYDMAIA INVVLAAVRR RMGMPYWSFS AWAKLQVKHA
VNFIGEFQKV VADEARRNDV HGVICGHIHH AVMEDVGGIH YINTGDWVES CTAVAEHHDG
HFELIEWGTR YNAADQPRLL GPPEPIRIFP VENPAGTETQ AARCNA
|
|---|
| |