| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1888 |
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| Symbol | |
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| ID | 7387200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1562062 |
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| End bp | 1563234 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651162 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549359 |
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| Protein GI | 222148402 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCTA TCGCTCTCAT CGTTGTCGCG TCCTGTTGTT TCATTACCCT CGGGCCAGCC
GGTCCGGTGC GGGCCGCCCC AAGCTGCGAG GCTATTCGGG CCGAGCTTGC CCAGACACCT
GTCGTAATTA GCAATTCTCA GGACGTGCGC GCCTATTCGG GAGCTGTGAC CCGGCAGGAT
TTCGAGATCC GTAAATTGCA ACGCACCCTG CAACAGGCCG GATGCTCCTC CAGTATCGCC
ATTCTCGACG GACATGGACA GGATCTCTGC GCGCCAATGC AGGAGAGCCT TGCCGTCATG
CAGGAAAACA AGCGTCAGCT TCTGATCGAA CGCAATGCGG CGGGCATGAA GGGCGGCGTC
AATCCCCGCC ACGAGGAACT GACGGCTGCT TTGCAATCGA ATGGCTGTGA TATCACCGAA
CCGGCCCCGG CACTCCAGGA CACGGATGAC AGCGAGGAGA CGGCCAGGCC CTTTGAGGCC
CCGGTCTATC CGGATTACCC ATTGCGCAAC GAGGCGCCGA TTTCATCATC CAGCAACGGC
CTTATGCTGC CTTCGGGACA GGGCGGATAC AGAACGCTCT GCGTCCGAAC CTGCGATGGC
GGCTTTTTCC CGATCTCGCC CAGCACACCC GCCCGCGATT TTGGTCGCGA TGCCGAAACA
TGCAACCGGC TTTGTCCAGG TACCGAAGCC GAACTCTATT ATTCCCGCCT CACCGACGAG
GCCAAGGATA TGGTTTCAAC CGTGACCGGC CAGCCTTATC GCGATATGCC CCATGCTTTT
GCCTATCTCA GCCGGGTACC CGGGCAGCCG GGACAATGCA GTTGCAACAG GAGCAACTCT
GACGGCTTGC AGACCAATGC TCCAAAGCCT GGTTTAGGGA CTGATTCTGG CGGGTCCTCA
GTCATTTCCA TCACATCCAA TGGATCCGCC GCCAGCACCA GACAGATGGA TGCCCCGCCT
GGTGCGCAGG TCAAAACGTC GACCGACCAA AAGGCGACGA CTGGCATGGA AGCCACGAAT
AAGCCAGTTC CTGAACCTGA GGCAGTGAGC CGACCCTATG ATCCAGGACG CCAATCGGTA
CGCCGCGTTG GCCCAACGTT CCTGCCGTCC AACACCAGCC AGATTGACCT CGTTCATCCA
GCGCTTCCAG GCGCACAACC GGTTCAGGAA TAG
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| Protein sequence | MRAIALIVVA SCCFITLGPA GPVRAAPSCE AIRAELAQTP VVISNSQDVR AYSGAVTRQD
FEIRKLQRTL QQAGCSSSIA ILDGHGQDLC APMQESLAVM QENKRQLLIE RNAAGMKGGV
NPRHEELTAA LQSNGCDITE PAPALQDTDD SEETARPFEA PVYPDYPLRN EAPISSSSNG
LMLPSGQGGY RTLCVRTCDG GFFPISPSTP ARDFGRDAET CNRLCPGTEA ELYYSRLTDE
AKDMVSTVTG QPYRDMPHAF AYLSRVPGQP GQCSCNRSNS DGLQTNAPKP GLGTDSGGSS
VISITSNGSA ASTRQMDAPP GAQVKTSTDQ KATTGMEATN KPVPEPEAVS RPYDPGRQSV
RRVGPTFLPS NTSQIDLVHP ALPGAQPVQE
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