| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1869 |
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| Symbol | rplQ |
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| ID | 7386827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1546858 |
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| End bp | 1547283 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651151 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_002549348 |
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| Protein GI | 222148391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCATC AGAAAGCCGG CCGCAAGCTG AACCGTACCG CCAGCCACCG TAAGGCAATG
TTTGCCAATA TGGCGGCTTC GCTCATCACC CATGAGCAAA TTGTCACGAC CCTGCCAAAG
GCGAAGGAAA TTCGCCCGAT CGTAGAACGG CTTGTCACGC TCGGCAAGCG CGGCGACCTG
CACGCTCGTC GTCAGGCCAT TTCGCAGATC CGCGATCAGG ATGCTGTTCG CAAGCTGTTC
GATGCGATTG CTACTCGTTA CGCTAGCCGT AACGGCGGCT ACCTGCGTAT CATGAAGGCT
GGTTTCCGTC AGGGCGACAA TGCTCCTCTG GCCGTTATCG AGTTCGTTGA GCGCGATGTC
GATGCCAAGG GTGCAGCTGA CAAGGCTCGC GTTGCGGCTG AAGCAGAAAC CGCTGAAGCA
GCATAA
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| Protein sequence | MRHQKAGRKL NRTASHRKAM FANMAASLIT HEQIVTTLPK AKEIRPIVER LVTLGKRGDL
HARRQAISQI RDQDAVRKLF DAIATRYASR NGGYLRIMKA GFRQGDNAPL AVIEFVERDV
DAKGAADKAR VAAEAETAEA A
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