Gene Avi_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1851 
SymbolrplX 
ID7386813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1538194 
End bp1538502 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content56% 
IMG OID643651137 
Product50S ribosomal protein L24 
Protein accessionYP_002549334 
Protein GI222148377 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.369616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA TTCGTAAGGG CGACAAGGTC GTCGTACTCA CCGGCAAGGA CAAGGGTCGT 
TCTGGTGAAG TCATTCAAGT GATGCCGAAG GAAGACCGTG CGGTCGTTCA GGGGATCAAC
GTCGTAAAGC GCCACCAGCG CCAGACGCAG ACCCAGGAAG CCGGTATCAT CAACAAGGAA
GCCTCTGTGC ACCTTTCCAA CCTTGCTATT GCAGACAAGG ACGGCAAGCC GACTCGCGTT
GGTTTCTCCG TTGTCGATGG CAAGAAGGTT CGCGTTGCCA AGCGTTCGGG GGAAGTGATC
GATGGCTGA
 
Protein sequence
MQKIRKGDKV VVLTGKDKGR SGEVIQVMPK EDRAVVQGIN VVKRHQRQTQ TQEAGIINKE 
ASVHLSNLAI ADKDGKPTRV GFSVVDGKKV RVAKRSGEVI DG