| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1844 |
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| Symbol | rpsS |
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| ID | 7386806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1535279 |
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| End bp | 1535557 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643651130 |
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| Product | 30S ribosomal protein S19 |
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| Protein accession | YP_002549327 |
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| Protein GI | 222148370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0185] Ribosomal protein S19 |
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| TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00983892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT CAGTATGGAA AGGCCCCTTC GTTGACGGCT ACCTTCTTAA GAAGGCGGAA
AAAGTTCGCG AGAGCGGTCG TAGTGAAGTG ATCAAGATGT GGACCCGTCG GTCGACGATC
TTGCCCCAGT TTGTCGGTTT GACGTTCGGC GTCTATAACG GCAGCAAGCA TATCCCGGTC
AGCGTCAACG AAGACATGGT TGGCCATAAA TTCGGTGAAT TCGCTCCGAC CCGGACCTAT
TACGGTCACG GTGCGGACAA GAAAGCGAAG AGGAAGTAA
|
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| Protein sequence | MARSVWKGPF VDGYLLKKAE KVRESGRSEV IKMWTRRSTI LPQFVGLTFG VYNGSKHIPV
SVNEDMVGHK FGEFAPTRTY YGHGADKKAK RK
|
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