Gene Avi_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1835 
SymbolfusA 
ID7386799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1528703 
End bp1530802 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content56% 
IMG OID643651123 
Productelongation factor G 
Protein accessionYP_002549320 
Protein GI222148363 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.223914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCG AATATAAAAT CGAAGACTAC CGCAATTTCG GGATCATGGC GCATATCGAC 
GCCGGCAAGA CCACGACGAC TGAGCGGATT CTCTACTACA CCGGCAAGTC GCACAAGATC
GGCGAAGTTC ATGATGGCGC AGCCACGATG GACTGGATGG AGCAGGAGCA GGAGCGTGGT
ATCACCATCA CCTCTGCTGC GACCACGACC TACTGGAAGG GTCGCGATGG CAAGATGCGC
CGCTTTAACA TCATCGACAC CCCCGGCCAC GTTGACTTCA CGATTGAAGT AGAACGTTCG
CTTCGGGTTC TCGATGGCGC TATCGCGCTC CTCGATGCCA ACGCAGGCGT TGAGCCGCAG
ACGGAAACTG TTTGGCGTCA GGCTGAAAAG TACAACGTTC CGCGGATGAT CTTCTGCAAC
AAGATGGACA AGACCGGCGC TGACTTTTAC CGTTCGGTAG AAATGATCAA GACCCGTCTC
GGTGCCACCG CTGTTGTTAT GCAGCTGCCA ATCGGCGCTG AAACAGAGTT CAAGGGCGTT
GTTGACCTGA TCGAGATGAA CGCTCTCGTT TGGCGCGATG AATCTCTGGG CGCGGCTTGG
GACGTTACGG AAATCCCTGA TGACCTGAAG GAAAAGGCCG TTGAATATCG CGAAAAGCTG
ATCGAGACCG TTGTCGAGAT CGACGAACAG GCGATGGAAG ACTACCTGAA CGGCATCATG
CCTGATAATG ACAAGATCCG CGCTCTCGTT CGTCAGGGCA CGATTGAAGT CAAGTTCCAT
CCGATGTTCT GCGGTACTGC CTTCAAGAAC AAGGGCGTTC AGCCTTTGCT CGACGCTGTT
TGTGAGTATC TTCCTTCTCC GCTCGATATC CCTGCTATCA AGGGTATCGA TGTTAAGACC
GACGGTGAAA TCGAACGTCA TCCTGATGAC GCCGAGCCTT TGTCGATGCT GGCGTTCAAG
ATCATGAACG ACCCCTTCGT CGGTTCGCTG ACATTCTGCC GTATCTACTC CGGCAAGCTC
GAAAAGGGCG CATCGGTCAT GAACACGGTC AAGGAAAAGC GCGAACGCGT TGGCCGTATG
CTCCAGATGC ATTCCAACAG CCGTGAAGAC ATCGAAGAAG CCTTTGCAGG CGACATCGTT
GCCCTGGCTG GCCTGAAGGA AAGCACCACG GGCGATACGC TCTGCGATCC CCTGAACCAG
GTTATCCTGG AGCGCATGGA ATTCCCCGAG CCGGTCATTC AGATCGCCAT CGAGCCGAAG
ACCAAGGGCG ACCAGGAAAA GATGGGCCTC GCGCTCAACC GTCTTGCTGC TGAGGATCCG
TCGTTCCGCG TCAAGACCGA CCAGGAATCT GGCCAGACGA TCATCGCCGG CATGGGTGAA
CTTCACCTCG ACATCATCGT CGACCGTATG CGTCGTGAGT TCAAGGTAGA AGCAACTGTC
GGCGCGCCGC AGGTTGCCTA TCGCGAAACC ATTACGCGTC AGCACGAAGA AGACTACACT
CACAAGAAGC AGTCTGGTGG TACGGGTCAG TTCGCCCGCG TCAAGATCAT CTTCGAACCC
AATCCTGAAG GTGATGAGTT CAAGTTCGAT TCGAAGATCG TCGGTGGCTC TGTTCCCAAG
GAATACATCC CTGGCGTTCA GAAGGGTATC GAAAGCGTTC TGTCTTCCGG TCCGCTGGCT
GGCTTCCCGA TGCTCGGCGT CAAGGCGACG CTCATCGACG GTGCTTACCA CGATGTTGAC
TCGTCGGTTC TGGCGTTCGA AATCGCGTCT CGCGCTTGCT TCCGTGAAGC AGCAAAGAAG
GCTGGTGCAC AGCTGCTTGA GCCGATGATG AAGGTTGAAG TTGTGACCCC CGAAGATTAC
GTCGGTGACG TGATCGGCGA CCTGAACTCC CGCCGTGGTC AGATCCAGGG CCAGGAAAGC
CGTGGTATCG CCGTTGTCAT CAACGCGCAT GTGCCGCTGG CCAACATGTT CAAATACGTC
GACAACCTGC GCTCCATGAG CCAGGGTCGC GCTCAGTACT CGATGGTGTT CGATCACTAT
TCGCCCGTTC CGAGCAATGT CGCTGCCGAA ATTCAGGCAA AGTACTCCGG TCAGAAATGA
 
Protein sequence
MAREYKIEDY RNFGIMAHID AGKTTTTERI LYYTGKSHKI GEVHDGAATM DWMEQEQERG 
ITITSAATTT YWKGRDGKMR RFNIIDTPGH VDFTIEVERS LRVLDGAIAL LDANAGVEPQ
TETVWRQAEK YNVPRMIFCN KMDKTGADFY RSVEMIKTRL GATAVVMQLP IGAETEFKGV
VDLIEMNALV WRDESLGAAW DVTEIPDDLK EKAVEYREKL IETVVEIDEQ AMEDYLNGIM
PDNDKIRALV RQGTIEVKFH PMFCGTAFKN KGVQPLLDAV CEYLPSPLDI PAIKGIDVKT
DGEIERHPDD AEPLSMLAFK IMNDPFVGSL TFCRIYSGKL EKGASVMNTV KEKRERVGRM
LQMHSNSRED IEEAFAGDIV ALAGLKESTT GDTLCDPLNQ VILERMEFPE PVIQIAIEPK
TKGDQEKMGL ALNRLAAEDP SFRVKTDQES GQTIIAGMGE LHLDIIVDRM RREFKVEATV
GAPQVAYRET ITRQHEEDYT HKKQSGGTGQ FARVKIIFEP NPEGDEFKFD SKIVGGSVPK
EYIPGVQKGI ESVLSSGPLA GFPMLGVKAT LIDGAYHDVD SSVLAFEIAS RACFREAAKK
AGAQLLEPMM KVEVVTPEDY VGDVIGDLNS RRGQIQGQES RGIAVVINAH VPLANMFKYV
DNLRSMSQGR AQYSMVFDHY SPVPSNVAAE IQAKYSGQK