Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1833 |
Symbol | rpsL |
ID | 7386797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 1527507 |
End bp | 1528115 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643651121 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_002549318 |
Protein GI | 222148361 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0567288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTCA GGACATATTG TTCTGAAGTT TGCCCCAGGC TTAGGATCCA AACGCACTTT GAAGACATGA ATGCTGCACG CATGACGCAG TCGCATGCGT CCTCTGCTTT TTGTGGTCCA TCCGGAAGTC CGGATCGGGC CACATTCGCG CATGGCGAAA ATTGTGCGAG CGCCGCCGGA AACGGCACAA ACGGGCCTGA AAAGGCTCAA GTGACAAGAA TTATAAGGGA TGGTTCTATG CCTACCGTAA ATCAGCTGAT CCGCAAGCCG CGTCAGGCGC AGGTAAAGCG CAACAAGGTT CCTGCCTTGC AGGAAAATCC ACAGAAGCGC GGCGTTTGCA CCCGCGTTTA TACCACGACC CCGAAGAAGC CGAACTCGGC TCTGCGTAAG GTTGCCAAGA TCCGTTTGAC CAATGGCTTC GAAGTCATCG GCTACATTCC GGGTGAAGGC CATAACCTGC AGGAACACTC TGTGGTCATG ATCCGTGGCG GCCGCGTGAA GGACTTGCCT GGCGTTCGTT ACCACATCAT CCGTGGTGTT CTCGATACCC AGGGTGTCAA GAACCGTAAG CAGCGCCGTT CCAAGTATGG TGCAAAGCGT CCGAAGTAA
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Protein sequence | MIFRTYCSEV CPRLRIQTHF EDMNAARMTQ SHASSAFCGP SGSPDRATFA HGENCASAAG NGTNGPEKAQ VTRIIRDGSM PTVNQLIRKP RQAQVKRNKV PALQENPQKR GVCTRVYTTT PKKPNSALRK VAKIRLTNGF EVIGYIPGEG HNLQEHSVVM IRGGRVKDLP GVRYHIIRGV LDTQGVKNRK QRRSKYGAKR PK
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