| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1823 |
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| Symbol | rplL |
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| ID | 7386792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1517013 |
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| End bp | 1517387 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651116 |
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| Product | 50S ribosomal protein L7/L12 |
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| Protein accession | YP_002549313 |
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| Protein GI | 222148356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0222] Ribosomal protein L7/L12 |
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| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATC TCGCTAAGAT CGTAGAAGAC CTCTCCTCTT TGACCGTTCT GGAAGCTGCT
GAGCTTTCCA AGCTGCTCGA AGAAAAGTGG GGCGTATCTG CAGCTGCTCC TGTGGCTGTT
GCTGCTGCCG GCGGTGGTGC TGCCGCCGTT GTTGAAGAAG AAAAGACTGA ATTCGACGTT
ATCCTGACGG ATGCCGGCGC AAACAAGATC AACGTCATCA AGGAAGTTCG CGCGATCACA
GGCCTCGGCC TGAAGGAAGC CAAGGACCTC GTTGAAGGCG CTCCGAAGGC TGTCAAGGAA
GCCGTTTCCA AGGCTGAAGC TGCAGACCTG AAGAAGAAGC TTGAAGACGC TGGCGCCAAG
GTTGACGTCA AGTAA
|
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| Protein sequence | MADLAKIVED LSSLTVLEAA ELSKLLEEKW GVSAAAPVAV AAAGGGAAAV VEEEKTEFDV
ILTDAGANKI NVIKEVRAIT GLGLKEAKDL VEGAPKAVKE AVSKAEAADL KKKLEDAGAK
VDVK
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