| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1819 |
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| Symbol | rplK |
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| ID | 7386789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1514953 |
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| End bp | 1515384 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643651113 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_002549310 |
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| Protein GI | 222148353 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.674274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AAGTTGCAGG CCAGCTCAAG CTTCAGGTCA AGGCAGGATC GGCTAACCCG
TCCCCGCCAA TCGGTCCTGC GCTTGGTCAG CGTGGCGTAA ATATCATGGA ATTCTGCAAG
GCGTTCAATG CCGCTACGCA GGAAATGGAA AAGGGCATGC CGATCCCGGT CGTCATTACC
TATTACCAGG ACAAGTCCTT CACCTTCATC ATGAAGCAGC CGCCAGTGAC TTACTGGTTG
AAGAAGGAAG CTAAGATCCA GTCCGGTTCT AAGACTCCGG GTAAGGGTGG AAAAGCTGGT
ACTATCACTA AGGCTCAGGT TCGCACGATC GCTGAAGCCA AGATGAAGGA CCTGAATGCT
GCCGACGTTG ACGGCGCTAT GGCAATGGTT GAGGGTTCTG CCCGCTCCAT GGGCCTGGAA
GTGGTAGGTT GA
|
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| Protein sequence | MAKKVAGQLK LQVKAGSANP SPPIGPALGQ RGVNIMEFCK AFNAATQEME KGMPIPVVIT
YYQDKSFTFI MKQPPVTYWL KKEAKIQSGS KTPGKGGKAG TITKAQVRTI AEAKMKDLNA
ADVDGAMAMV EGSARSMGLE VVG
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