| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1817 |
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| Symbol | secE |
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| ID | 7388007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1514059 |
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| End bp | 1514259 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643651111 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_002549308 |
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| Protein GI | 222148351 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.723904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCGA AGACTAATCC ATTTGCGTTT TTGCAGCAGG TTCGCTCCGA AACGTCCAAA
GTCACTTGGC CGTCGCGCCG CGAGACTGTG ATCTCGACGC TGATGGTGTT GGCCATGGTG
ATTTTTGCCT CGCTGTTTTT CTTTGCGGCG GATCAGGTTA TCGGCTGGGT TTTGAGCCTT
GTCCTGAATC TCGGCAATTA A
|
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| Protein sequence | MASKTNPFAF LQQVRSETSK VTWPSRRETV ISTLMVLAMV IFASLFFFAA DQVIGWVLSL
VLNLGN
|
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| |