| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1801 |
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| Symbol | |
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| ID | 7386778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1504948 |
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| End bp | 1505847 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651098 |
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| Product | orotidine 5-phosphate decarboxylase protein |
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| Protein accession | YP_002549299 |
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| Protein GI | 222148342 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.291497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACAT GGACTGAAAT CGTCAAAGCC AATGTCGAGC GCTATGGTGA TCTGGTCGCT
GGAATTGATC CAGCGCCGGG CGATGTTCCC GCCGTCTTCG AGAATGGCGA TGGATGCTGG
ATCGAAGACT ATGTGGACTT TCTTCTCGAC ACGATCGAGG GGCATGTTGG CTTCGTCAAG
TTCCAGTCGG CTTATTTCGA GGCTTGCGGC ATCAAAGGCT TGAAGGCTCT GTCGATGGGC
ATGGCACGAG CGCGGGCGTC GGGCATTGGC GTTATCCTCG ATGCAAAGCG TGGCGATATC
GGTGCAACGG CGTCAGCCTA TGCGAGGGCT TATCTGGTTC CCGGCGCTGA AGGGGGAAGC
GGTGACTTCG AGGCGGATTG CCTGACCGTC AATCCGCTGA TGGGACCCGA CACGCTTGCC
CCCTTTGTCG AGGCCGCGCA GGCGTATGGC AAAGGCCTGT TTGTCCTCTG CCGCACGTCC
AATCCGGGCG CAGGCTGGCT ACAGGACAAG ATGACGGGCA ACCAGCTTAT TTCGGACCGG
CTGGCTGGGC TGATCGGTGG TTTTATACCT GACACGATTG AGGACGGTGA TCTCAGTGCC
ATTGGGGCGG TTATCGGTGC GACGGTTCCT GCGGAAGGAC GTCGCCTTAG ACAATTTATG
CCCCGTTCGA TCATTCTTGC ACCGGGATTG GGTGCGCAAG GCGCCGATCC GCTGGCCATC
CACTCCTTGC GTGGAACCGT ACCCGGTGAC TTGCTGATAC CCGTGTCTCG TGGCCTGACG
AGGGTTGAAG ACAGAAGCCT TTCCCTGGGC GCGTATGCCG AGTTGATCCT CGGCAGGCTG
GACAGTTTCA AGCAGTCCAT TGCCTATGAT TACAGCCGGC CAAGGAGCAG AGCGGTCTGA
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| Protein sequence | MPTWTEIVKA NVERYGDLVA GIDPAPGDVP AVFENGDGCW IEDYVDFLLD TIEGHVGFVK
FQSAYFEACG IKGLKALSMG MARARASGIG VILDAKRGDI GATASAYARA YLVPGAEGGS
GDFEADCLTV NPLMGPDTLA PFVEAAQAYG KGLFVLCRTS NPGAGWLQDK MTGNQLISDR
LAGLIGGFIP DTIEDGDLSA IGAVIGATVP AEGRRLRQFM PRSIILAPGL GAQGADPLAI
HSLRGTVPGD LLIPVSRGLT RVEDRSLSLG AYAELILGRL DSFKQSIAYD YSRPRSRAV
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