| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1795 |
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| Symbol | amiA |
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| ID | 7386775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1499498 |
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| End bp | 1500802 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643651095 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_002549296 |
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| Protein GI | 222148339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGTGA ATGATCGGGA CTTTCAAAGC GTGAGCGATA TGGTATCGCG GCATGGACGG
ATGGTGCGTT CAACGATGGT AAGCATGAGG CAAGGCAAGC GGCCTGGCGT GGCGATCCTG
TGGCTATTGG CCTGTATTAT CGCGGGCTTG GCGCCTGCAA AAGCCTTTTC GGCGGAACGT
CTCGCCGTGT TTGCAGCCCG TATCGCCGGT GACGATGCCC GCACCCGTAT CGTCATGGAT
TTCGACCAGA AGCCGGAAAC GACCGTGCGC TATATCGGCA ATCCGGATCG CATCGTCGTC
GATCTGCCAG CCACCGTCTT TGCCTTTCCA GCCGAGGCAC TTGTCGCCCG CGGCCTGTTT
CGGGAGATCC GTTTCGGCTC CATCGACGCT ACCCATTCGC GTATCGTGCT GACCACGGCG
CGGCCTGCCA AACTCGTCCT CACCGACATT CGTAAAAATG ACGAGGGGCA GGGATTTCGA
CTGATTCTCG ATGCGGAGAT GACCGATAAT GACACATTTT CCAAGCTGGT CGCCTCCCAG
GCCTGGGAGG CCGATGCCTA CAGCAATGGC AAGAGCCCGC GCATAGAACA GGCGGCGCCC
GCGACGGATG GCGAGTTTCT GATTGCCGTC GATGCCGGCC ATGGCGGTAT CGATACCGGG
GCCACAGGCA AGGCCACCAA TACGCCGGAA AAAACCGTGA CGCTGGGCTT TGCCAGGGCG
CTGGCTGTCG AGCTTAACAG GCAAAAGGGC GTCAAGGCCT TCCTGACCCG CGATGGCGAT
ACGTTCCTGT CCCTGTCGCA GCGCGTGACG CTGGCCCGGC AGAAAGGCGC AAACCTGTTT
ATTTCGCTGC ATGCCGATAT GCTGGGCCAG GCCAATATTC GCGGCGCGAC CGTTTATACC
ATTTCCGACA AGGCATCCGA CCATCTTGCC GAGGCCGCAG CGGCGCGTGA AAACCAATCG
GACGAGGTTG GTGGTGTCGA TGCGAGCGCC GAACCGCAGG AAGTCTCCGA TATCCTGGCG
GACCTTACCC GGCGGGAGAC TCAGGCCTTT TCCATCGCCA TGGCCAAATC GGTGGTGACG
TCGTTCGACG GGCAGATCAA CCTGATCAAC AATCCGCATC GCTTTGCCGG ATTCCGAGTG
TTGCAGGCCC AGGATGTGCC GTCGGTGCTG CTCGAACTTG GGTTTCTGTC CAACAAGGAG
GACGAGAAGC TCTTGCTCGA TCCGGCCTGG CGCGGCAAAG TGGTGAAACT GATCGCCGAG
GCGGTGAAGA AATATCGTCA GCCGCTTGTT GCCAAAGGTG GTTGA
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| Protein sequence | MGVNDRDFQS VSDMVSRHGR MVRSTMVSMR QGKRPGVAIL WLLACIIAGL APAKAFSAER
LAVFAARIAG DDARTRIVMD FDQKPETTVR YIGNPDRIVV DLPATVFAFP AEALVARGLF
REIRFGSIDA THSRIVLTTA RPAKLVLTDI RKNDEGQGFR LILDAEMTDN DTFSKLVASQ
AWEADAYSNG KSPRIEQAAP ATDGEFLIAV DAGHGGIDTG ATGKATNTPE KTVTLGFARA
LAVELNRQKG VKAFLTRDGD TFLSLSQRVT LARQKGANLF ISLHADMLGQ ANIRGATVYT
ISDKASDHLA EAAAARENQS DEVGGVDASA EPQEVSDILA DLTRRETQAF SIAMAKSVVT
SFDGQINLIN NPHRFAGFRV LQAQDVPSVL LELGFLSNKE DEKLLLDPAW RGKVVKLIAE
AVKKYRQPLV AKGG
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