| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1790 |
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| Symbol | |
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| ID | 7386771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1492707 |
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| End bp | 1493531 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651091 |
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| Product | outer membrane protein |
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| Protein accession | YP_002549292 |
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| Protein GI | 222148335 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1651] Protein-disulfide isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGA AAACGCAGGC CAAAAATGAT GGCCGAAGAC AATGGCCAGA GACGAGGATT
GACATGAAGA TACGATTTTT TCGCACTGCC GTTTTGGCAA CGCTCATTGC CTCGACCGGC
CTCGGCGCGC CAGCCTACGC GCTGGATGAC AAGCAGAAGC AAGAAATCGG CGCCTTCATC
AAGGAATATC TGATCGCCCA TCCGGAAATC ATGCTCGACG TGCAGGACGC CTTGCAAAAG
AAGCAGGAAG CGGCCCGCGC CAGCCAGGCC TCCAGCGGCA TTGAACTCAA CAAGGCTGAG
ATCTTCAATT CGAAGGATGA TATCGTCCTT GGCAATCCGA AGGGTGACGT GACCATCGTT
GAGTTCTTCG ACTATAATTG CGGCTATTGC CGCCATGCGC TGGCCGACAT GGATACCATC
CTGAAGACCG ATAAGAATGT GCGGTTCGTC CTGAAGGAAT TCCCGATTCT TGGGCCGGAT
TCGGTCGCCG CGCACCGCGT TGCGGACGCA TTCCGCAAGC TGGCACCGGA AAAATACAGC
GACTTCCACC ATGCCCTGCT TGGCAGTGAA GGTCGCGCCA CGCAGGAAAG CGCCATAGAT
GCGGGTGTGA TGCTGGGGGT TTCGGAAGCA GCCCTTCGTA AGGAAATGAC TGACAGCCCC
AATGACACGT CCGTCAAAAA GGTCTATCAA CTGGCCCAGG ACCTAGGCAT CAACGGCACA
CCCGCCTATG TGATCGGCAA TGAACTAGTT TCCGGTGCCA TCGGCGCAGA TGCTCTCCAG
GAGAAGCTGA CGAATGTTCG CACCTGCGGC AAATCAACCT GCTGA
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| Protein sequence | MPPKTQAKND GRRQWPETRI DMKIRFFRTA VLATLIASTG LGAPAYALDD KQKQEIGAFI
KEYLIAHPEI MLDVQDALQK KQEAARASQA SSGIELNKAE IFNSKDDIVL GNPKGDVTIV
EFFDYNCGYC RHALADMDTI LKTDKNVRFV LKEFPILGPD SVAAHRVADA FRKLAPEKYS
DFHHALLGSE GRATQESAID AGVMLGVSEA ALRKEMTDSP NDTSVKKVYQ LAQDLGINGT
PAYVIGNELV SGAIGADALQ EKLTNVRTCG KSTC
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