Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1788 |
Symbol | accB |
ID | 7386769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1491630 |
End bp | 1492118 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643651089 |
Product | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit |
Protein accession | YP_002549290 |
Protein GI | 222148333 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | [TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.468263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGA AGAAAACCGG CATCGATCAG GCGCTTATCC GCGAGCTGGC GAATATCTTG AACGAGACCG ATCTGAGCGA GATCGAAGTG GAACAGGATG CGCTGAGAAT TCGCGTTTCC CGCGCCGCGC CGCAAATGGT GGCTCCGCAG ATGATGGCAA TGCCGCAGAT GCAATATGGC GCGCCTTATG GTGCCCCGGC ACCTGCCGCA GCACCTGCTC CGGTCGCGGT AGCGGCTCCT GCTGCCCGCG ATCTGTCCAA AGCCGTAACG GCTCCCATGG TCGGCACGGT CTATATGTCC CCCGCCCCCG GTTCAAAGCC CTTCATCGAA GTCGGCTCGA CGGTCAAGGA AGGCCAGACG CTGCTGATCA TCGAAGCCAT GAAGACAATG AACCAGATCC CTTCGCCTCG TTCCGGCAAG GTCGTCGAAA TCCTCATCGA CGATGCAAGC CCGGTCGAAT ATGGCGAAGC CATGGTCATC ATCGAGTAA
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Protein sequence | MAEKKTGIDQ ALIRELANIL NETDLSEIEV EQDALRIRVS RAAPQMVAPQ MMAMPQMQYG APYGAPAPAA APAPVAVAAP AARDLSKAVT APMVGTVYMS PAPGSKPFIE VGSTVKEGQT LLIIEAMKTM NQIPSPRSGK VVEILIDDAS PVEYGEAMVI IE
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