Gene Avi_1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1788 
SymbolaccB 
ID7386769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp1491630 
End bp1492118 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID643651089 
Productacetyl-CoA carboxylase biotin carboxyl carrier protein subunit 
Protein accessionYP_002549290 
Protein GI222148333 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.468263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AGAAAACCGG CATCGATCAG GCGCTTATCC GCGAGCTGGC GAATATCTTG 
AACGAGACCG ATCTGAGCGA GATCGAAGTG GAACAGGATG CGCTGAGAAT TCGCGTTTCC
CGCGCCGCGC CGCAAATGGT GGCTCCGCAG ATGATGGCAA TGCCGCAGAT GCAATATGGC
GCGCCTTATG GTGCCCCGGC ACCTGCCGCA GCACCTGCTC CGGTCGCGGT AGCGGCTCCT
GCTGCCCGCG ATCTGTCCAA AGCCGTAACG GCTCCCATGG TCGGCACGGT CTATATGTCC
CCCGCCCCCG GTTCAAAGCC CTTCATCGAA GTCGGCTCGA CGGTCAAGGA AGGCCAGACG
CTGCTGATCA TCGAAGCCAT GAAGACAATG AACCAGATCC CTTCGCCTCG TTCCGGCAAG
GTCGTCGAAA TCCTCATCGA CGATGCAAGC CCGGTCGAAT ATGGCGAAGC CATGGTCATC
ATCGAGTAA
 
Protein sequence
MAEKKTGIDQ ALIRELANIL NETDLSEIEV EQDALRIRVS RAAPQMVAPQ MMAMPQMQYG 
APYGAPAPAA APAPVAVAAP AARDLSKAVT APMVGTVYMS PAPGSKPFIE VGSTVKEGQT
LLIIEAMKTM NQIPSPRSGK VVEILIDDAS PVEYGEAMVI IE