| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1784 |
|---|
| Symbol | |
|---|
| ID | 7386765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 1488549 |
|---|
| End bp | 1488947 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643651085 |
|---|
| Product | NADH dehydrogenase |
|---|
| Protein accession | YP_002549286 |
|---|
| Protein GI | 222148329 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.795414 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC TTTTGTTGCA GATTTTCACC TGGTGGAGTG GCCAGACCGT CGGAACCCGT
TTCTTCACCT GGCGTGAAGG TAAGCGCGTT GGCGAAGACG AGGCAGGCAA TGTCTACTAT
GAAGGCGGCA TGAGCAGCTT CGGCCTGCAA CGTCGCTGGG TGATTTATAA CGGCTACGCT
GACGCCTCCG CCATTCCGCC CGGCTGGCAT GGCTGGATGC ATCACCGCAC CGACGTGCCG
CCCACCAAGG ACAATTACGT GCCGAGGGAA TGGGAAAAGC CGCATGAGGC GAACCTGACC
GGCACCGCCA AAGCCTATCG TCCGCAGGGC TCGATTGCTG CAACCGGTGC TCGTCCGCGC
GTCACCGGTG ACTACGACGC CTGGACGCCC GGCAACTAA
|
|---|
| Protein sequence | MKQLLLQIFT WWSGQTVGTR FFTWREGKRV GEDEAGNVYY EGGMSSFGLQ RRWVIYNGYA
DASAIPPGWH GWMHHRTDVP PTKDNYVPRE WEKPHEANLT GTAKAYRPQG SIAATGARPR
VTGDYDAWTP GN
|
|---|
| |