| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1776 |
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| Symbol | |
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| ID | 7386759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1483032 |
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| End bp | 1484474 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643651079 |
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| Product | hypothetical protein |
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| Protein accession | YP_002549280 |
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| Protein GI | 222148323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.108123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA CCCTTCGCAC CAGCGTCTTC CTCATCCTCG CGATTACGCT TTACCGCATC
GTGATGCTGC ATTTCGACGG TACAGACCTG TTTGTGGACG AGGCGCAATA TTGGCTGTGG
TCCACCCATC TCGACTTCGG CTATTATTCC AAGCCACCGA TGATCGCCTG GGTGATCCAT
CTGTTCACGC TGATCGGCGG CAGCCAGGAT ATTTTCTGGA TCCGTGTGGC AAGCCCGCTG
TTCCATATGG CAACGGCGCT GCTGCTGATC CCGGCAACGG CCCGGCTGAC GGGCTCTGAA
AAGGCCGGGC TGTGGACGGG ACTGAGCTAT GCGACCCTGC CGGGCGTGGC GCTGTCATCG
GTTTTCATGT CCACCGACAC GATCCTGTTT CCCTTCCTGG CGCTGACGCT ACTGTGTTAT
TCGCATCTGA TCGAGCGACG CGCGGCTGGC TATGCGGTTC TGATGGGCAT CGCAATCGGC
TTCGGAACTC TCTCGAAATA TGCGATGCTG TATTTCGCCG CGACTGCGAT CATTGCCGCC
ATCGCCCTGC CCAAGGCACG CATCGCGCTC AGAGACACCG TGCTTGCCAT CTTCGCGGCA
GTCGCGGTTA TCGCTCCAAA TATCTGGTGG AACAGCACCC ATGGCGGCGC CACGCTGAAA
CACACTTCGG AAAATGCCGA TTGGCATGGG CTGAACTTCA AGATCGGCAA GGCGGCAGAG
TTTCTCGGCA GTCAGTTCGG CGTGGTCGGA CCGGTGCTGT TTGCCGCCCT GCTGATTGTG
TTTTACCGGC TGCTGCGGGG CCGCGCCTCC ACGACCGAAA AACATCTGTT CATCCTCTCT
TGGCCGATCA TTCTCGCCAT CGTTTTCCAG GCCTTGATGT CGCGCGCCTA TGCCAATTGG
GCAGCAACCG CTTACGCAGC CGGCACCATG TTGGCGGTCT GGTATCTGCT CCAGTCCTCG
CCTCGGGCGC TGAAAATCTC ACTGGCGATC AATGGCATCA TCGCCGTCGC CTTTCCGCTG
CTGACGGCTT TTCCTCAGGA CGTCACGACA CCAAAAGGCC AATCGGTGCT GGCGCGTTAT
CTGGGACGAA CCGATCTGAG CTGGGCGATT GCTACGACGG CCGCGAGGAC CGGCACCGCG
ACCATCGTCG CTGATAACCG CGATATTCTT GCCGATCTCT TCCACACGCT GCGCGACGAA
CCCTTCGCCA TCAAGGCCCG GACCGCCGGT GGTTTTCCGC GCAATTATTA TGAACAGGAA
TTTCCGCTGA CCTCGGCGCT CGGCACGGAA ACCGTGCTGT ATGTGACCGG AGCCAATGTC
ACCTGCCACG GCGCAGTGGT CGATCCTGTG GCAGACCTGA CGCCAAAGTA CGGATATCTC
ATGGGACGCA AGCTGAAAGC CTACGCCATT TCCGCCAGTT GCCTGACCAA CCAGCTGACA
TAA
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| Protein sequence | MRITLRTSVF LILAITLYRI VMLHFDGTDL FVDEAQYWLW STHLDFGYYS KPPMIAWVIH
LFTLIGGSQD IFWIRVASPL FHMATALLLI PATARLTGSE KAGLWTGLSY ATLPGVALSS
VFMSTDTILF PFLALTLLCY SHLIERRAAG YAVLMGIAIG FGTLSKYAML YFAATAIIAA
IALPKARIAL RDTVLAIFAA VAVIAPNIWW NSTHGGATLK HTSENADWHG LNFKIGKAAE
FLGSQFGVVG PVLFAALLIV FYRLLRGRAS TTEKHLFILS WPIILAIVFQ ALMSRAYANW
AATAYAAGTM LAVWYLLQSS PRALKISLAI NGIIAVAFPL LTAFPQDVTT PKGQSVLARY
LGRTDLSWAI ATTAARTGTA TIVADNRDIL ADLFHTLRDE PFAIKARTAG GFPRNYYEQE
FPLTSALGTE TVLYVTGANV TCHGAVVDPV ADLTPKYGYL MGRKLKAYAI SASCLTNQLT
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